Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHRNA1P02708 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHRNA1P02708 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRNA1P02708 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHRNA1P02708 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.67■□□□□ 0.9
CHRNA1P02708 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.67■□□□□ 0.9
CHRNA1P02708 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHRNA1P02708 Z82202.1-201ENST00000623446 1880 ntBASIC20.67■□□□□ 0.9
CHRNA1P02708 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.66■□□□□ 0.9
CHRNA1P02708 SLC25A24-204ENST00000569674 2357 ntBASIC20.66■□□□□ 0.9
CHRNA1P02708 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA1P02708 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA1P02708 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA1P02708 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA1P02708 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRNA1P02708 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.66■□□□□ 0.9
CHRNA1P02708 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRNA1P02708 AC092119.3-201ENST00000612618 583 ntBASIC20.66■□□□□ 0.9
CHRNA1P02708 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA1P02708 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA1P02708 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA1P02708 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHRNA1P02708 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CHRNA1P02708 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRNA1P02708 AC125437.2-201ENST00000625180 2167 ntBASIC20.66■□□□□ 0.9
CHRNA1P02708 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRNA1P02708 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRNA1P02708 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.66■□□□□ 0.9
CHRNA1P02708 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRNA1P02708 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 TEX21P-204ENST00000641479 1693 ntBASIC20.65■□□□□ 0.9
CHRNA1P02708 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.65■□□□□ 0.9
CHRNA1P02708 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHRNA1P02708 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CHRNA1P02708 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.65■□□□□ 0.9
CHRNA1P02708 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 AC011498.5-201ENST00000592027 486 ntBASIC20.65■□□□□ 0.9
CHRNA1P02708 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHRNA1P02708 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHRNA1P02708 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRNA1P02708 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CHRNA1P02708 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.9
CHRNA1P02708 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNA1P02708 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNA1P02708 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.64■□□□□ 0.9
CHRNA1P02708 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.64■□□□□ 0.9
CHRNA1P02708 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNA1P02708 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHRNA1P02708 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CHRNA1P02708 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRNA1P02708 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRNA1P02708 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHRNA1P02708 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CHRNA1P02708 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRNA1P02708 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.64■□□□□ 0.89
CHRNA1P02708 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.64■□□□□ 0.89
CHRNA1P02708 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.64■□□□□ 0.89
CHRNA1P02708 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.64■□□□□ 0.89
CHRNA1P02708 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRNA1P02708 AL157888.1-201ENST00000631930 593 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms