Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 KRT18P38-201ENST00000449496 1282 ntBASIC21.34■■□□□ 1.01
GGPS1O95749 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
GGPS1O95749 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 NEK4P2-201ENST00000580004 1012 ntBASIC21.34■■□□□ 1.01
GGPS1O95749 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.34■■□□□ 1.01
GGPS1O95749 CR769767.2-201ENST00000622735 460 ntBASIC21.34■■□□□ 1.01
GGPS1O95749 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
GGPS1O95749 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
GGPS1O95749 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
GGPS1O95749 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
GGPS1O95749 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
GGPS1O95749 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.33■■□□□ 1.01
GGPS1O95749 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.33■■□□□ 1.01
GGPS1O95749 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.33■■□□□ 1.01
GGPS1O95749 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.33■■□□□ 1.01
GGPS1O95749 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
GGPS1O95749 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.33■■□□□ 1.01
GGPS1O95749 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.33■■□□□ 1.01
GGPS1O95749 AC091076.1-201ENST00000610741 619 ntBASIC21.33■■□□□ 1.01
GGPS1O95749 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.33■■□□□ 1.01
GGPS1O95749 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
GGPS1O95749 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.33■■□□□ 1
GGPS1O95749 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.33■■□□□ 1
GGPS1O95749 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
GGPS1O95749 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
GGPS1O95749 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
GGPS1O95749 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
GGPS1O95749 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
GGPS1O95749 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.32■■□□□ 1
GGPS1O95749 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
GGPS1O95749 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.32■■□□□ 1
GGPS1O95749 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.32■■□□□ 1
GGPS1O95749 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.32■■□□□ 1
GGPS1O95749 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 Z82202.1-201ENST00000623446 1880 ntBASIC21.32■■□□□ 1
GGPS1O95749 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.32■■□□□ 1
GGPS1O95749 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GGPS1O95749 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.32■■□□□ 1
GGPS1O95749 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.32■■□□□ 1
GGPS1O95749 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.31■■□□□ 1
GGPS1O95749 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
GGPS1O95749 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 GPAT2P1-201ENST00000444924 1672 ntBASIC21.31■■□□□ 1
GGPS1O95749 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GGPS1O95749 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
GGPS1O95749 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.31■■□□□ 1
GGPS1O95749 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.31■■□□□ 1
GGPS1O95749 AL671277.2-201ENST00000458060 996 ntBASIC21.31■■□□□ 1
GGPS1O95749 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.31■■□□□ 1
GGPS1O95749 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
GGPS1O95749 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.31■■□□□ 1
GGPS1O95749 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 GCSHP2-201ENST00000560971 527 ntBASIC21.31■■□□□ 1
GGPS1O95749 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GGPS1O95749 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.31■■□□□ 1
GGPS1O95749 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.31■■□□□ 1
GGPS1O95749 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.31■■□□□ 1
GGPS1O95749 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.31■■□□□ 1
GGPS1O95749 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.31■■□□□ 1
GGPS1O95749 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
GGPS1O95749 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GGPS1O95749 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GGPS1O95749 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
GGPS1O95749 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.31■■□□□ 1
GGPS1O95749 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GGPS1O95749 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GGPS1O95749 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GGPS1O95749 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.3■■□□□ 1
GGPS1O95749 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GGPS1O95749 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.3■■□□□ 1
GGPS1O95749 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms