Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ABCA1O95477 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ABCA1O95477 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.91■□□□□ 0.14
ABCA1O95477 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ABCA1O95477 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ABCA1O95477 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.91■□□□□ 0.14
ABCA1O95477 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.91■□□□□ 0.14
ABCA1O95477 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.91■□□□□ 0.14
ABCA1O95477 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.91■□□□□ 0.14
ABCA1O95477 NEK4P2-201ENST00000580004 1012 ntBASIC15.91■□□□□ 0.14
ABCA1O95477 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
ABCA1O95477 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.91■□□□□ 0.14
ABCA1O95477 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ABCA1O95477 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
ABCA1O95477 AL691432.3-201ENST00000621860 400 ntBASIC15.91■□□□□ 0.14
ABCA1O95477 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.91■□□□□ 0.14
ABCA1O95477 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.9■□□□□ 0.14
ABCA1O95477 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 GABARAPL3-202ENST00000624044 1851 ntBASIC15.9■□□□□ 0.14
ABCA1O95477 KRT8P41-201ENST00000533985 1514 ntBASIC15.9■□□□□ 0.14
ABCA1O95477 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.9■□□□□ 0.14
ABCA1O95477 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.9■□□□□ 0.14
ABCA1O95477 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.9■□□□□ 0.14
ABCA1O95477 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.9■□□□□ 0.14
ABCA1O95477 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.9■□□□□ 0.14
ABCA1O95477 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.9■□□□□ 0.14
ABCA1O95477 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
ABCA1O95477 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
ABCA1O95477 AC012313.10-201ENST00000623509 926 ntBASIC15.9■□□□□ 0.14
ABCA1O95477 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.9■□□□□ 0.14
ABCA1O95477 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.9■□□□□ 0.14
ABCA1O95477 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.9■□□□□ 0.14
ABCA1O95477 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ABCA1O95477 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.89■□□□□ 0.13
ABCA1O95477 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCA1O95477 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCA1O95477 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.89■□□□□ 0.13
ABCA1O95477 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 HBZP1-201ENST00000354915 429 ntBASIC15.89■□□□□ 0.13
ABCA1O95477 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCA1O95477 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCA1O95477 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCA1O95477 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.89■□□□□ 0.13
ABCA1O95477 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.89■□□□□ 0.13
ABCA1O95477 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ABCA1O95477 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ABCA1O95477 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
ABCA1O95477 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ABCA1O95477 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCA1O95477 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCA1O95477 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCA1O95477 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.88■□□□□ 0.13
ABCA1O95477 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCA1O95477 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCA1O95477 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ABCA1O95477 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.88■□□□□ 0.13
ABCA1O95477 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.88■□□□□ 0.13
ABCA1O95477 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCA1O95477 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCA1O95477 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.88■□□□□ 0.13
ABCA1O95477 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ABCA1O95477 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ABCA1O95477 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms