Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
LTN1O94822 TSSC2-201ENST00000450217 709 ntBASIC25.22■■□□□ 1.63
LTN1O94822 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC25.22■■□□□ 1.63
LTN1O94822 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC25.22■■□□□ 1.63
LTN1O94822 AP002414.4-201ENST00000589764 1148 ntBASIC25.22■■□□□ 1.63
LTN1O94822 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
LTN1O94822 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
LTN1O94822 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC25.22■■□□□ 1.63
LTN1O94822 AC125437.2-201ENST00000625180 2167 ntBASIC25.21■■□□□ 1.63
LTN1O94822 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LTN1O94822 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
LTN1O94822 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC25.21■■□□□ 1.63
LTN1O94822 AC079781.3-201ENST00000449110 356 ntBASIC25.21■■□□□ 1.63
LTN1O94822 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
LTN1O94822 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LTN1O94822 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LTN1O94822 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC25.21■■□□□ 1.63
LTN1O94822 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.21■■□□□ 1.63
LTN1O94822 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
LTN1O94822 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC25.21■■□□□ 1.63
LTN1O94822 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LTN1O94822 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LTN1O94822 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC25.21■■□□□ 1.63
LTN1O94822 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC25.21■■□□□ 1.63
LTN1O94822 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC25.21■■□□□ 1.63
LTN1O94822 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC25.21■■□□□ 1.63
LTN1O94822 AC010240.3-201ENST00000607688 395 ntBASIC25.21■■□□□ 1.63
LTN1O94822 AL031008.1-201ENST00000619963 541 ntBASIC25.21■■□□□ 1.63
LTN1O94822 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
LTN1O94822 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC25.2■■□□□ 1.63
LTN1O94822 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC25.2■■□□□ 1.63
LTN1O94822 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
LTN1O94822 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
LTN1O94822 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
LTN1O94822 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC25.2■■□□□ 1.62
LTN1O94822 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC25.2■■□□□ 1.62
LTN1O94822 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.2■■□□□ 1.62
LTN1O94822 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
LTN1O94822 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LTN1O94822 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LTN1O94822 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LTN1O94822 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
LTN1O94822 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC25.19■■□□□ 1.62
LTN1O94822 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC25.19■■□□□ 1.62
LTN1O94822 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
LTN1O94822 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
LTN1O94822 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.19■■□□□ 1.62
LTN1O94822 DRAXINP1-201ENST00000437611 948 ntBASIC25.19■■□□□ 1.62
LTN1O94822 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC25.19■■□□□ 1.62
LTN1O94822 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC25.19■■□□□ 1.62
LTN1O94822 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC25.19■■□□□ 1.62
LTN1O94822 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LTN1O94822 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 TREX1-205ENST00000625293 1783 ntBASIC25.18■■□□□ 1.62
LTN1O94822 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
LTN1O94822 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 GRAMD4P1-201ENST00000435181 1110 ntBASIC25.18■■□□□ 1.62
LTN1O94822 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC25.18■■□□□ 1.62
LTN1O94822 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 AC112497.1-201ENST00000624824 639 ntBASIC25.18■■□□□ 1.62
LTN1O94822 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
LTN1O94822 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC25.18■■□□□ 1.62
LTN1O94822 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
LTN1O94822 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
LTN1O94822 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
LTN1O94822 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC25.18■■□□□ 1.62
LTN1O94822 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 NAT14-202ENST00000587400 416 ntTSL 5 BASIC25.18■■□□□ 1.62
LTN1O94822 TK1-205ENST00000590862 642 ntTSL 3 BASIC25.18■■□□□ 1.62
LTN1O94822 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC25.18■■□□□ 1.62
LTN1O94822 LITAF-220ENST00000620789 692 ntTSL 5 BASIC25.18■■□□□ 1.62
LTN1O94822 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
LTN1O94822 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC25.17■■□□□ 1.62
LTN1O94822 TSPY22P-201ENST00000427496 604 ntBASIC25.17■■□□□ 1.62
LTN1O94822 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 AC104390.1-201ENST00000555663 520 ntBASIC25.17■■□□□ 1.62
LTN1O94822 GPR32P1-201ENST00000601788 811 ntBASIC25.17■■□□□ 1.62
LTN1O94822 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms