Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF4O60810 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
PRAMEF4O60810 AC012618.2-201ENST00000428058 849 ntBASIC18.29■□□□□ 0.52
PRAMEF4O60810 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF4O60810 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF4O60810 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.29■□□□□ 0.52
PRAMEF4O60810 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.29■□□□□ 0.52
PRAMEF4O60810 AL049637.2-201ENST00000641778 930 ntBASIC18.29■□□□□ 0.52
PRAMEF4O60810 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF4O60810 AL135905.2-201ENST00000584934 1404 ntBASIC18.29■□□□□ 0.52
PRAMEF4O60810 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF4O60810 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF4O60810 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRAMEF4O60810 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.29■□□□□ 0.52
PRAMEF4O60810 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.29■□□□□ 0.52
PRAMEF4O60810 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 AC116562.2-201ENST00000507042 360 ntBASIC18.28■□□□□ 0.52
PRAMEF4O60810 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 AC083906.6-201ENST00000641366 219 ntBASIC18.28■□□□□ 0.52
PRAMEF4O60810 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRAMEF4O60810 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.28■□□□□ 0.52
PRAMEF4O60810 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 PRSS44-201ENST00000515154 1146 ntBASIC18.27■□□□□ 0.52
PRAMEF4O60810 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRAMEF4O60810 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PRAMEF4O60810 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.27■□□□□ 0.51
PRAMEF4O60810 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRAMEF4O60810 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRAMEF4O60810 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRAMEF4O60810 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 NUDT16P1-203ENST00000513809 620 ntBASIC18.26■□□□□ 0.51
PRAMEF4O60810 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 CKBP1-201ENST00000565489 1086 ntBASIC18.26■□□□□ 0.51
PRAMEF4O60810 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
PRAMEF4O60810 AP000692.2-201ENST00000608391 879 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms