Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.19■□□□□ 0.5
LCMT2O60294 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCMT2O60294 AC098818.2-201ENST00000564925 2320 ntBASIC18.18■□□□□ 0.5
LCMT2O60294 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LCMT2O60294 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.18■□□□□ 0.5
LCMT2O60294 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.18■□□□□ 0.5
LCMT2O60294 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LCMT2O60294 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.18■□□□□ 0.5
LCMT2O60294 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.18■□□□□ 0.5
LCMT2O60294 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.18■□□□□ 0.5
LCMT2O60294 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 AP005242.2-201ENST00000580065 1175 ntBASIC18.18■□□□□ 0.5
LCMT2O60294 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.18■□□□□ 0.5
LCMT2O60294 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.18■□□□□ 0.5
LCMT2O60294 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.18■□□□□ 0.5
LCMT2O60294 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.18■□□□□ 0.5
LCMT2O60294 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LCMT2O60294 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LCMT2O60294 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LCMT2O60294 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
LCMT2O60294 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.17■□□□□ 0.5
LCMT2O60294 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.17■□□□□ 0.5
LCMT2O60294 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LCMT2O60294 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LCMT2O60294 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.17■□□□□ 0.5
LCMT2O60294 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.17■□□□□ 0.5
LCMT2O60294 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.17■□□□□ 0.5
LCMT2O60294 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.17■□□□□ 0.5
LCMT2O60294 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.17■□□□□ 0.5
LCMT2O60294 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LCMT2O60294 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.17■□□□□ 0.5
LCMT2O60294 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.17■□□□□ 0.5
LCMT2O60294 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.17■□□□□ 0.5
LCMT2O60294 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
LCMT2O60294 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LCMT2O60294 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LCMT2O60294 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 AC018445.3-201ENST00000624177 1945 ntBASIC18.16■□□□□ 0.5
LCMT2O60294 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 CYP2D8P-201ENST00000433633 1490 ntBASIC18.16■□□□□ 0.5
LCMT2O60294 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.16■□□□□ 0.5
LCMT2O60294 MMP23A-201ENST00000234610 1017 ntBASIC18.16■□□□□ 0.5
LCMT2O60294 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.16■□□□□ 0.5
LCMT2O60294 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.16■□□□□ 0.5
LCMT2O60294 BX088651.1-201ENST00000540551 451 ntBASIC18.16■□□□□ 0.5
LCMT2O60294 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.16■□□□□ 0.5
LCMT2O60294 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.16■□□□□ 0.5
LCMT2O60294 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.16■□□□□ 0.5
LCMT2O60294 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.16■□□□□ 0.5
LCMT2O60294 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.16■□□□□ 0.5
LCMT2O60294 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LCMT2O60294 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LCMT2O60294 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.15■□□□□ 0.5
LCMT2O60294 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LCMT2O60294 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.15■□□□□ 0.5
LCMT2O60294 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LCMT2O60294 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.15■□□□□ 0.5
LCMT2O60294 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
LCMT2O60294 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.15■□□□□ 0.5
LCMT2O60294 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LCMT2O60294 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms