Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.72■■□□□ 1.71
MSH5O43196 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.72■■□□□ 1.71
MSH5O43196 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MSH5O43196 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
MSH5O43196 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
MSH5O43196 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.72■■□□□ 1.71
MSH5O43196 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
MSH5O43196 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
MSH5O43196 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 AC096656.1-201ENST00000623826 1364 ntBASIC25.71■■□□□ 1.71
MSH5O43196 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC25.71■■□□□ 1.71
MSH5O43196 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
MSH5O43196 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.71■■□□□ 1.71
MSH5O43196 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.71■■□□□ 1.71
MSH5O43196 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.71■■□□□ 1.71
MSH5O43196 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC25.71■■□□□ 1.71
MSH5O43196 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.71■■□□□ 1.71
MSH5O43196 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC25.71■■□□□ 1.71
MSH5O43196 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC25.71■■□□□ 1.71
MSH5O43196 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC25.71■■□□□ 1.71
MSH5O43196 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC25.71■■□□□ 1.71
MSH5O43196 AL121894.2-201ENST00000602977 491 ntBASIC25.71■■□□□ 1.71
MSH5O43196 AC017076.1-201ENST00000607613 578 ntBASIC25.71■■□□□ 1.71
MSH5O43196 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
MSH5O43196 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC25.71■■□□□ 1.71
MSH5O43196 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC25.71■■□□□ 1.71
MSH5O43196 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
MSH5O43196 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.71
MSH5O43196 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
MSH5O43196 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
MSH5O43196 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.7■■□□□ 1.7
MSH5O43196 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 HSFY4P-201ENST00000415994 1181 ntBASIC25.7■■□□□ 1.7
MSH5O43196 DUXAP7-201ENST00000431038 689 ntBASIC25.7■■□□□ 1.7
MSH5O43196 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.7■■□□□ 1.7
MSH5O43196 AC092451.2-201ENST00000538746 658 ntBASIC25.7■■□□□ 1.7
MSH5O43196 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.7■■□□□ 1.7
MSH5O43196 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.7■■□□□ 1.7
MSH5O43196 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 AC093503.3-201ENST00000624917 2352 ntBASIC25.7■■□□□ 1.7
MSH5O43196 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
MSH5O43196 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MSH5O43196 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MSH5O43196 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.69■■□□□ 1.7
MSH5O43196 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
MSH5O43196 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
MSH5O43196 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
MSH5O43196 KCNMB3-201ENST00000314235 1485 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MSH5O43196 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.69■■□□□ 1.7
MSH5O43196 AL355994.1-201ENST00000424379 260 ntBASIC25.69■■□□□ 1.7
MSH5O43196 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC25.69■■□□□ 1.7
MSH5O43196 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MSH5O43196 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.69■■□□□ 1.7
MSH5O43196 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC25.69■■□□□ 1.7
MSH5O43196 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC25.69■■□□□ 1.7
MSH5O43196 ACTG1P22-201ENST00000603793 1099 ntBASIC25.69■■□□□ 1.7
MSH5O43196 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.69■■□□□ 1.7
MSH5O43196 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.69■■□□□ 1.7
MSH5O43196 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MSH5O43196 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
MSH5O43196 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
MSH5O43196 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC25.68■■□□□ 1.7
MSH5O43196 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.68■■□□□ 1.7
MSH5O43196 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
MSH5O43196 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.68■■□□□ 1.7
MSH5O43196 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.68■■□□□ 1.7
MSH5O43196 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC25.68■■□□□ 1.7
MSH5O43196 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.68■■□□□ 1.7
MSH5O43196 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
MSH5O43196 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MSH5O43196 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
MSH5O43196 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
MSH5O43196 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MSH5O43196 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
MSH5O43196 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
MSH5O43196 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MSH5O43196 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC25.67■■□□□ 1.7
MSH5O43196 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
MSH5O43196 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MSH5O43196 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MSH5O43196 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
MSH5O43196 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.67■■□□□ 1.7
MSH5O43196 TPM4P1-201ENST00000436100 807 ntBASIC25.67■■□□□ 1.7
MSH5O43196 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC25.67■■□□□ 1.7
MSH5O43196 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.67■■□□□ 1.7
MSH5O43196 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms