Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 SPDYE15P-201ENST00000424157 909 ntBASIC21.76■■□□□ 1.07
ATP2A1O14983 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.76■■□□□ 1.07
ATP2A1O14983 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
ATP2A1O14983 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.76■■□□□ 1.07
ATP2A1O14983 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP2A1O14983 TREX1-205ENST00000625293 1783 ntBASIC21.76■■□□□ 1.07
ATP2A1O14983 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ATP2A1O14983 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP2A1O14983 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP2A1O14983 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ATP2A1O14983 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ATP2A1O14983 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ATP2A1O14983 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP2A1O14983 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
ATP2A1O14983 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ATP2A1O14983 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP2A1O14983 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.75■■□□□ 1.07
ATP2A1O14983 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ATP2A1O14983 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP2A1O14983 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP2A1O14983 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.75■■□□□ 1.07
ATP2A1O14983 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP2A1O14983 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP2A1O14983 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2A1O14983 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2A1O14983 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATP2A1O14983 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
ATP2A1O14983 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2A1O14983 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2A1O14983 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2A1O14983 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP2A1O14983 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATP2A1O14983 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.74■■□□□ 1.07
ATP2A1O14983 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP2A1O14983 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2A1O14983 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2A1O14983 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2A1O14983 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ATP2A1O14983 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
ATP2A1O14983 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2A1O14983 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP2A1O14983 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2A1O14983 VENTXP5-201ENST00000523979 775 ntBASIC21.73■■□□□ 1.07
ATP2A1O14983 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.73■■□□□ 1.07
ATP2A1O14983 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP2A1O14983 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A1O14983 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
ATP2A1O14983 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP2A1O14983 LINC01311-201ENST00000565162 1445 ntBASIC21.72■■□□□ 1.07
ATP2A1O14983 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms