Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.83■□□□□ 0.6
TLR4O00206 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.83■□□□□ 0.6
TLR4O00206 NEK4P2-201ENST00000580004 1012 ntBASIC18.83■□□□□ 0.6
TLR4O00206 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.83■□□□□ 0.6
TLR4O00206 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.83■□□□□ 0.6
TLR4O00206 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TLR4O00206 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TLR4O00206 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.83■□□□□ 0.6
TLR4O00206 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.83■□□□□ 0.6
TLR4O00206 IER3-202ENST00000376377 1350 ntBASIC18.82■□□□□ 0.6
TLR4O00206 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.82■□□□□ 0.6
TLR4O00206 AC099778.1-201ENST00000568593 1911 ntBASIC18.82■□□□□ 0.6
TLR4O00206 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.82■□□□□ 0.6
TLR4O00206 AC112907.3-201ENST00000577781 2400 ntBASIC18.82■□□□□ 0.6
TLR4O00206 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR4O00206 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.82■□□□□ 0.6
TLR4O00206 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR4O00206 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR4O00206 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.82■□□□□ 0.6
TLR4O00206 AC009947.2-201ENST00000444014 672 ntBASIC18.82■□□□□ 0.6
TLR4O00206 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.82■□□□□ 0.6
TLR4O00206 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TLR4O00206 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.82■□□□□ 0.6
TLR4O00206 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.82■□□□□ 0.6
TLR4O00206 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.82■□□□□ 0.6
TLR4O00206 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR4O00206 AC104417.2-201ENST00000562989 1793 ntBASIC18.82■□□□□ 0.6
TLR4O00206 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR4O00206 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR4O00206 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TLR4O00206 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR4O00206 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.82■□□□□ 0.6
TLR4O00206 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TLR4O00206 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TLR4O00206 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TLR4O00206 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
TLR4O00206 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 KRT18P38-201ENST00000449496 1282 ntBASIC18.81■□□□□ 0.6
TLR4O00206 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.81■□□□□ 0.6
TLR4O00206 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.81■□□□□ 0.6
TLR4O00206 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.81■□□□□ 0.6
TLR4O00206 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.81■□□□□ 0.6
TLR4O00206 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TLR4O00206 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.81■□□□□ 0.6
TLR4O00206 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TLR4O00206 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.8■□□□□ 0.6
TLR4O00206 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.8■□□□□ 0.6
TLR4O00206 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.8■□□□□ 0.6
TLR4O00206 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.8■□□□□ 0.6
TLR4O00206 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.8■□□□□ 0.6
TLR4O00206 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TLR4O00206 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TLR4O00206 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.79■□□□□ 0.6
TLR4O00206 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TLR4O00206 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
TLR4O00206 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms