Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CHKB-CPT1BH3BT56 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AC126335.2-201ENST00000623362 4637 ntBASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 DUX4L4-201ENST00000566884 1269 ntBASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 RAP2CP1-202ENST00000605179 643 ntBASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AC092720.2-201ENST00000602388 1665 ntBASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AC092850.2-201ENST00000623821 2697 ntBASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.56□□□□□ -0.72
CHKB-CPT1BH3BT56 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CHKB-CPT1BH3BT56 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms