Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NPIPA3F8WFD2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA3F8WFD2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA3F8WFD2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
NPIPA3F8WFD2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.32■□□□□ 0.36
NPIPA3F8WFD2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPA3F8WFD2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 NTF6B-201ENST00000591913 560 ntBASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 AC006011.2-201ENST00000621313 1158 ntBASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NPIPA3F8WFD2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 AC007663.1-201ENST00000438948 1240 ntBASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 BX664615.1-201ENST00000443558 458 ntBASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NPIPA3F8WFD2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 AK4P3-201ENST00000418260 669 ntBASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 KRT8P41-201ENST00000533985 1514 ntBASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 ZNF815P-204ENST00000434898 1737 ntBASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NPIPA3F8WFD2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NPIPA3F8WFD2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA3F8WFD2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA3F8WFD2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA3F8WFD2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA3F8WFD2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA3F8WFD2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NPIPA3F8WFD2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms