Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TBC1D3FA6NER0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 AL671277.2-201ENST00000458060 996 ntBASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 AC008622.2-201ENST00000617006 1229 ntBASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TBC1D3FA6NER0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 CR769767.2-201ENST00000622735 460 ntBASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 Z82202.1-201ENST00000623446 1880 ntBASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
TBC1D3FA6NER0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 GCSHP2-201ENST00000560971 527 ntBASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 AL121956.5-201ENST00000625261 221 ntBASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.91■□□□□ 0.62
TBC1D3FA6NER0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 PCED1CP-201ENST00000419887 785 ntBASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 KRT18P38-201ENST00000449496 1282 ntBASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 AP000550.4-202ENST00000639755 178 ntBASIC18.9■□□□□ 0.62
TBC1D3FA6NER0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms