Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 HTR7P1-201ENST00000538670 1336 ntBASIC17.48■□□□□ 0.39
CDHR4A6H8M9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 AL353807.1-201ENST00000427475 662 ntBASIC17.48■□□□□ 0.39
CDHR4A6H8M9 AC004980.1-204ENST00000429707 299 ntBASIC17.48■□□□□ 0.39
CDHR4A6H8M9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 AP002982.1-201ENST00000492365 877 ntBASIC17.48■□□□□ 0.39
CDHR4A6H8M9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 Z98044.1-201ENST00000632503 1764 ntBASIC17.48■□□□□ 0.39
CDHR4A6H8M9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.48■□□□□ 0.39
CDHR4A6H8M9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 KSR1P1-201ENST00000446298 240 ntBASIC17.47■□□□□ 0.39
CDHR4A6H8M9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 AL512353.2-201ENST00000448759 1962 ntBASIC17.47■□□□□ 0.39
CDHR4A6H8M9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.47■□□□□ 0.39
CDHR4A6H8M9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.46■□□□□ 0.39
CDHR4A6H8M9 FAM201B-201ENST00000458407 597 ntBASIC17.46■□□□□ 0.39
CDHR4A6H8M9 RPS2P4-201ENST00000476944 856 ntBASIC17.46■□□□□ 0.39
CDHR4A6H8M9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 AC083906.6-201ENST00000641366 219 ntBASIC17.46■□□□□ 0.39
CDHR4A6H8M9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDHR4A6H8M9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDHR4A6H8M9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDHR4A6H8M9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDHR4A6H8M9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDHR4A6H8M9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDHR4A6H8M9 NEFHP1-201ENST00000412845 2629 ntBASIC17.45■□□□□ 0.38
CDHR4A6H8M9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms