Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 FAM8A6P-201ENST00000407496 1135 ntBASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 AL441883.1-201ENST00000566170 1045 ntBASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM28A0A1B0GU29 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM28A0A1B0GU29 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SMIM28A0A1B0GU29 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM28A0A1B0GU29 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM28A0A1B0GU29 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.39■□□□□ 0.86
SMIM28A0A1B0GU29 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.39■□□□□ 0.86
SMIM28A0A1B0GU29 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.39■□□□□ 0.85
SMIM28A0A1B0GU29 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 LINC01238-205ENST00000567549 1107 ntBASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 NEK4P2-201ENST00000580004 1012 ntBASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.38■□□□□ 0.85
SMIM28A0A1B0GU29 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SMIM28A0A1B0GU29 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 FP475955.4-201ENST00000623131 1990 ntBASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 AP000523.1-201ENST00000398242 1049 ntBASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 AC087388.1-201ENST00000571370 1112 ntBASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMIM28A0A1B0GU29 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms