Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 WIZP1-201ENST00000531444 2299 ntBASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 AC097658.1-201ENST00000475555 843 ntBASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 MIR4758-201ENST00000577688 71 ntBASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV21A0A0B4J279 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRAV21A0A0B4J279 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 AC083906.2-201ENST00000511578 360 ntBASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 AL121829.2-201ENST00000620908 328 ntBASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 AC092437.1-201ENST00000624794 1048 ntBASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV21A0A0B4J279 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 AL512353.2-201ENST00000448759 1962 ntBASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
TRAV21A0A0B4J279 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms