Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KRTAP3-3Q9BYR6 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU1-23P-201ENST00000363361 144 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 SNORD114-6-201ENST00000364393 72 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU6-302P-201ENST00000365249 107 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 RNA5SP91-201ENST00000390902 119 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU6-1177P-201ENST00000391058 104 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC026254.1-201ENST00000479473 431 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 RN7SL797P-201ENST00000486314 297 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC117383.2-201ENST00000514722 322 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 IGLV1-62-201ENST00000518003 441 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC244505.7-201ENST00000599675 272 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
KRTAP3-3Q9BYR6 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 AC092376.2-201ENST00000622621 4116 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 RPL10P16-201ENST00000325000 645 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 MIR331-201ENST00000362302 94 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 SNORA31-201ENST00000362607 130 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 MIR545-201ENST00000385085 106 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU6-1250P-201ENST00000391218 107 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 AC113608.1-201ENST00000398740 305 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 RN7SKP271-201ENST00000410528 320 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 RPS29P5-201ENST00000452777 171 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 CYP2C59P-201ENST00000457790 269 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 LINC01085-203ENST00000511195 326 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 RNU6-902P-201ENST00000517212 91 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 SNORA70D-201ENST00000578836 135 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 AL591926.1-201ENST00000620542 217 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 AC073869.9-201ENST00000641610 120 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 TATDN2P3-201ENST00000452855 3665 ntBASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
KRTAP3-3Q9BYR6 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 SPATA31B1P-201ENST00000434692 4016 ntBASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KRTAP3-3Q9BYR6 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms