Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL513218.1-201ENST00000606527 391 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL049767.1-202ENST00000637826 242 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 EML5-201ENST00000380664 5910 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL731532.1-201ENST00000623972 4236 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC009053.1-202ENST00000563377 2051 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 DARS2-201ENST00000361951 3506 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 Z97832.2-201ENST00000605896 4261 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC110716.2-201ENST00000563865 3945 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 C3P1-202ENST00000497718 4954 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 CARF-201ENST00000320443 5209 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR101-2-201ENST00000362195 79 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 RN7SKP103-201ENST00000363848 320 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 SNORA25.8-201ENST00000364831 128 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNU6-828P-201ENST00000364876 107 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNA5SP97-201ENST00000365006 84 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNA5SP485-201ENST00000365053 119 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC097463.2-201ENST00000421074 142 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 HMGN2P38-201ENST00000423806 265 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 SS18L2P1-201ENST00000445923 213 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 snoU13.24-201ENST00000458998 104 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNU6-300P-201ENST00000459080 104 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 RPL7AP28-201ENST00000464513 571 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC091153.1-201ENST00000466297 402 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC008496.1-201ENST00000509131 295 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 ATP5LP3-201ENST00000514223 304 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 SNORD46.2-201ENST00000516021 102 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNU7-12P-201ENST00000516030 62 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 RN7SKP288-201ENST00000516227 268 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 SNORA25.16-201ENST00000516741 121 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 IGLV2-28-201ENST00000520681 304 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC008011.1-201ENST00000545989 227 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR3691-201ENST00000578066 90 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC233702.7-202ENST00000582941 211 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC020916.2-201ENST00000591242 360 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.91□□□□□ -2.1
KRTAP4-11Q9BYQ6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms