RNA–Protein interactions for RNA: ENST00000364876.1

RNU6-828P-201, Transcript of RNA, U6 small nuclear 828, pseudogene, humanhuman

BASIC

Gene RNU6-828P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-828P-201ENST00000364876 POTEDQ86YR6 584 aa5.76□□□□□ -1.49
RNU6-828P-201ENST00000364876 AEBP2Q6ZN18 517 aaPredicted RBP5.34□□□□□ -1.55
RNU6-828P-201ENST00000364876 CHIC1Q5VXU3 224 aa4.84□□□□□ -1.63
RNU6-828P-201ENST00000364876 SENP3Q9H4L4 574 aaPredicted RBP4.58□□□□□ -1.68
RNU6-828P-201ENST00000364876 FOXD1Q16676 465 aa4.43□□□□□ -1.7
RNU6-828P-201ENST00000364876 PHF23Q9BUL5 403 aaPredicted RBP4.42□□□□□ -1.7
RNU6-828P-201ENST00000364876 MSH5O43196 834 aa4.39□□□□□ -1.71
RNU6-828P-201ENST00000364876 POTEHQ6S545 545 aa4.32□□□□□ -1.72
RNU6-828P-201ENST00000364876 CACNB1Q02641 598 aaPredicted RBP4.26□□□□□ -1.73
RNU6-828P-201ENST00000364876 PIAS4Q8N2W9 510 aaPredicted RBP3.88□□□□□ -1.79
RNU6-828P-201ENST00000364876 PLSCR2Q9NRY7 297 aa3.88□□□□□ -1.79
RNU6-828P-201ENST00000364876 RNF39Q9H2S5 420 aa3.72□□□□□ -1.81
RNU6-828P-201ENST00000364876 SP7Q8TDD2 431 aaPredicted RBP3.66□□□□□ -1.82
RNU6-828P-201ENST00000364876 C1QBPQ07021 282 aaKnown RBP3.57□□□□□ -1.84
RNU6-828P-201ENST00000364876 PPP6R1Q9UPN7 881 aa3.53□□□□□ -1.84
RNU6-828P-201ENST00000364876 DMRT2Q9Y5R5 561 aa3.53□□□□□ -1.84
RNU6-828P-201ENST00000364876 ADRA2BP18089 450 aa3.43□□□□□ -1.86
RNU6-828P-201ENST00000364876 MAPK8IP2Q13387 824 aaPredicted RBP3.42□□□□□ -1.86
RNU6-828P-201ENST00000364876 LHX8Q68G74 356 aa3.4□□□□□ -1.87
RNU6-828P-201ENST00000364876 DCAF8L1A6NGE4 600 aa3.36□□□□□ -1.87
RNU6-828P-201ENST00000364876 CHRDL2Q6WN34 429 aa3.32□□□□□ -1.88
RNU6-828P-201ENST00000364876 POTEMA6NI47 508 aa3.26□□□□□ -1.89
RNU6-828P-201ENST00000364876 POTEGQ6S5H5 508 aa3.22□□□□□ -1.89
RNU6-828P-201ENST00000364876 DSG3P32926 999 aa3.2□□□□□ -1.9
RNU6-828P-201ENST00000364876 EVX2Q03828 476 aa3.19□□□□□ -1.9
RNU6-828P-201ENST00000364876 PCDH10Q9P2E7 1040 aa3.19□□□□□ -1.9
RNU6-828P-201ENST00000364876 HAX1O00165 279 aa3.18□□□□□ -1.9
RNU6-828P-201ENST00000364876 DNAJC5BQ9UF47 199 aa3.11□□□□□ -1.91
RNU6-828P-201ENST00000364876 HOXD11P31277 338 aaPredicted RBP3.09□□□□□ -1.91
RNU6-828P-201ENST00000364876 PIP4P2Q8N4L2 257 aa3.08□□□□□ -1.92
RNU6-828P-201ENST00000364876 SCAF1Q9H7N4 1312 aaKnown RBP3.02□□□□□ -1.93
RNU6-828P-201ENST00000364876 OTUD5Q96G74 571 aa3.02□□□□□ -1.93
RNU6-828P-201ENST00000364876 GABBR2O75899 941 aa3.01□□□□□ -1.93
RNU6-828P-201ENST00000364876 POTEIP0CG38 1075 aa3.01□□□□□ -1.93
RNU6-828P-201ENST00000364876 SPINK5Q9NQ38 1064 aaPredicted RBP3.01□□□□□ -1.93
RNU6-828P-201ENST00000364876 LCE2DQ5TA82 110 aaPredicted RBP3□□□□□ -1.93
RNU6-828P-201ENST00000364876 RBM42Q9BTD8 480 aaKnown RBP3□□□□□ -1.93
RNU6-828P-201ENST00000364876 CAPN15O75808 1086 aa2.97□□□□□ -1.93
RNU6-828P-201ENST00000364876 MMRN1Q13201 1228 aa2.94□□□□□ -1.94
RNU6-828P-201ENST00000364876 FXR2P51116 673 aaKnown RBP eCLIP2.92□□□□□ -1.94
RNU6-828P-201ENST00000364876 PLPPR3Q6T4P5 718 aa2.92□□□□□ -1.94
RNU6-828P-201ENST00000364876 POTEB2H3BUK9 544 aa2.88□□□□□ -1.95
RNU6-828P-201ENST00000364876 CDAN1Q8IWY9 1227 aa2.88□□□□□ -1.95
RNU6-828P-201ENST00000364876 C19orf67A6NJJ6 358 aa2.87□□□□□ -1.95
RNU6-828P-201ENST00000364876 ABCB7O75027 752 aa2.87□□□□□ -1.95
RNU6-828P-201ENST00000364876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNU6-828P-201ENST00000364876 SPNS2Q8IVW8 549 aa2.85□□□□□ -1.95
RNU6-828P-201ENST00000364876 RNF216Q9NWF9 866 aaPredicted RBP2.81□□□□□ -1.96
RNU6-828P-201ENST00000364876 U3KPZ7 1027 aaPredicted RBP2.8□□□□□ -1.96
RNU6-828P-201ENST00000364876 PITPNM1O00562 1244 aa2.79□□□□□ -1.96
RNU6-828P-201ENST00000364876 REM2Q8IYK8 340 aaPredicted RBP2.79□□□□□ -1.96
RNU6-828P-201ENST00000364876 FAM163AQ96GL9 167 aaPredicted RBP2.79□□□□□ -1.96
RNU6-828P-201ENST00000364876 AKT1S1Q96B36 256 aa2.78□□□□□ -1.96
RNU6-828P-201ENST00000364876 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
RNU6-828P-201ENST00000364876 POTEJP0CG39 1038 aa2.72□□□□□ -1.97
RNU6-828P-201ENST00000364876 TRHP20396 242 aaPredicted RBP2.72□□□□□ -1.97
RNU6-828P-201ENST00000364876 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
RNU6-828P-201ENST00000364876 DCBLD2Q96PD2 775 aa2.69□□□□□ -1.98
RNU6-828P-201ENST00000364876 ZNF219Q9P2Y4 722 aaPredicted RBP2.68□□□□□ -1.98
RNU6-828P-201ENST00000364876 PRKAR2AP13861 404 aaKnown RBP2.67□□□□□ -1.98
RNU6-828P-201ENST00000364876 CNKSR2Q8WXI2 1034 aa2.6□□□□□ -1.99
RNU6-828P-201ENST00000364876 CLCN6P51797 869 aa2.59□□□□□ -1.99
RNU6-828P-201ENST00000364876 MAMSTRQ6ZN01 415 aa2.59□□□□□ -1.99
RNU6-828P-201ENST00000364876 PELP1Q8IZL8 1130 aaKnown RBP2.58□□□□□ -2
RNU6-828P-201ENST00000364876 ST18O60284 1047 aa2.56□□□□□ -2
RNU6-828P-201ENST00000364876 CD44P16070 742 aaKnown RBP2.53□□□□□ -2
RNU6-828P-201ENST00000364876 KRTAP3-3Q9BYR6 98 aa2.53□□□□□ -2
RNU6-828P-201ENST00000364876 KRTAP3-2Q9BYR7 98 aa2.53□□□□□ -2
RNU6-828P-201ENST00000364876 SCUBE2Q9NQ36 999 aa2.53□□□□□ -2
RNU6-828P-201ENST00000364876 GALR2O43603 387 aaPredicted RBP2.52□□□□□ -2.01
RNU6-828P-201ENST00000364876 METRNQ9UJH8 293 aa2.52□□□□□ -2.01
RNU6-828P-201ENST00000364876 CHADLQ6NUI6 762 aa2.49□□□□□ -2.01
RNU6-828P-201ENST00000364876 APLP2Q06481 763 aa2.48□□□□□ -2.01
RNU6-828P-201ENST00000364876 PPP4R3CPQ6ZMV5 832 aa2.48□□□□□ -2.01
RNU6-828P-201ENST00000364876 ZNF579Q8NAF0 562 aaKnown RBP2.48□□□□□ -2.01
RNU6-828P-201ENST00000364876 POLA2Q14181 598 aa2.47□□□□□ -2.01
RNU6-828P-201ENST00000364876 OSCARQ8IYS5 282 aa2.47□□□□□ -2.01
RNU6-828P-201ENST00000364876 RNF166Q96A37 237 aaPredicted RBP2.46□□□□□ -2.02
RNU6-828P-201ENST00000364876 C7P10643 843 aa2.44□□□□□ -2.02
RNU6-828P-201ENST00000364876 SLC39A7Q92504 469 aa2.43□□□□□ -2.02
RNU6-828P-201ENST00000364876 MARVELD3Q96A59 401 aa2.43□□□□□ -2.02
RNU6-828P-201ENST00000364876 POTEB3A0JP26 581 aa2.42□□□□□ -2.02
RNU6-828P-201ENST00000364876 POTEFA5A3E0 1075 aa2.42□□□□□ -2.02
RNU6-828P-201ENST00000364876 POTEBQ6S5H4 581 aa2.42□□□□□ -2.02
RNU6-828P-201ENST00000364876 TMEM121BQ9BXQ6 578 aaPredicted RBP2.42□□□□□ -2.02
RNU6-828P-201ENST00000364876 ASTLQ6HA08 431 aaPredicted RBP2.4□□□□□ -2.03
RNU6-828P-201ENST00000364876 CLEC11AQ9Y240 323 aa2.38□□□□□ -2.03
RNU6-828P-201ENST00000364876 ATMINO43313 823 aaPredicted RBP2.37□□□□□ -2.03
RNU6-828P-201ENST00000364876 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.36□□□□□ -2.03
RNU6-828P-201ENST00000364876 SPDYE1Q8NFV5 336 aaPredicted RBP2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 HS3ST6Q96QI5 342 aa2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 KRTAP17-1Q9BYP8 105 aa2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 KRTAP4-8Q9BYQ9 185 aa2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 IRX2Q9BZI1 471 aaPredicted RBP2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 PLA2G2EQ9NZK7 142 aa2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 ZRANB1Q9UGI0 708 aa2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 MYT1LQ9UL68 1186 aa2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 FARP1Q9Y4F1 1045 aaPredicted RBP2.35□□□□□ -2.03
RNU6-828P-201ENST00000364876 SLAIN1Q8ND83 568 aa2.33□□□□□ -2.04
RNU6-828P-201ENST00000364876 KRTAP9-6A0A140TA67 174 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms