Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 TLK1P1-201ENST00000456760 2440 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AC126755.2-208ENST00000327792 462 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AC138969.1-213ENST00000331436 462 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 RNY1P11-201ENST00000363759 113 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 MT-TT-201ENST00000387460 66 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 RNU6-710P-201ENST00000410424 105 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AC114755.2-201ENST00000413520 361 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AL645608.4-201ENST00000423619 154 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 CYCSP40-201ENST00000575927 294 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 Y_RNA.757-201ENST00000578934 114 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 AL356575.1-201ENST00000603008 283 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 FAM27B-201ENST00000610601 213 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 MIR6758-201ENST00000620653 63 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 SDAD1P1-202ENST00000524156 2051 ntBASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.07□□□□□ -1.6
SCUBE3Q8IX30 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 RNU6-727P-201ENST00000363592 107 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 RNU6-1048P-201ENST00000364054 107 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 U8.7-201ENST00000364940 136 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 RNU6-728P-201ENST00000365375 104 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 AC068538.1-201ENST00000376856 336 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 SNORA75.5-201ENST00000391291 81 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 U3.30-201ENST00000391308 210 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 AC073264.2-201ENST00000448886 166 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 AL591473.1-201ENST00000464297 313 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 RNU6-561P-201ENST00000516222 102 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 RNU1-103P-201ENST00000516502 125 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 IGKV1-32-201ENST00000519290 311 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 AP001880.2-201ENST00000538233 448 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 MIR5096-201ENST00000583713 70 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 AL672167.1-204ENST00000641875 3017 ntBASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCUBE3Q8IX30 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 RNU6-454P-201ENST00000364292 107 ntBASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 SNORA40.5-201ENST00000391061 128 ntBASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 RPL21P17-201ENST00000397467 475 ntBASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 AL606845.1-201ENST00000404881 255 ntBASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 RNU6-772P-201ENST00000516042 105 ntBASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 AP006289.1-201ENST00000538089 277 ntBASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 MIR5699-201ENST00000578903 90 ntBASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
SCUBE3Q8IX30 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.04□□□□□ -1.6
SCUBE3Q8IX30 RNU6-799P-201ENST00000363567 107 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms