Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCUBE3Q8IX30 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SCUBE3Q8IX30 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SCUBE3Q8IX30 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCUBE3Q8IX30 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SCUBE3Q8IX30 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCUBE3Q8IX30 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCUBE3Q8IX30 AC073073.2-201ENST00000609827 2578 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 RNA5SP191-201ENST00000362585 102 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 SNORA25.7-201ENST00000364375 127 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 RNU6-969P-201ENST00000383900 105 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AL355497.1-201ENST00000406262 551 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AC068287.1-201ENST00000430283 295 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 HSPE1P13-201ENST00000451143 297 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 RPS4XP13-201ENST00000483219 789 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 RN7SL558P-201ENST00000497468 299 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AC108145.1-201ENST00000503770 153 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AC134698.5-201ENST00000519444 336 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AC118273.1-201ENST00000525324 3006 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 MIR3121-201ENST00000579680 77 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 IPO5P1-202ENST00000600039 287 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AC108081.1-201ENST00000604358 221 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AL121932.1-201ENST00000605542 214 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 AC068647.2-201ENST00000637380 353 ntBASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCUBE3Q8IX30 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 RNU6-235P-201ENST00000362644 107 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 Y_RNA.369-201ENST00000365568 117 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 RNU6-629P-201ENST00000384061 103 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 MIR526A2-201ENST00000390198 65 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 RN7SKP27-201ENST00000410684 333 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 AC244670.1-201ENST00000436879 112 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 AL135790.2-201ENST00000437701 267 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 RPL23AP70-201ENST00000483361 460 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 ENPP7P9-201ENST00000514456 627 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 SNORA31.20-201ENST00000517111 133 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 RNU6-709P-201ENST00000517257 104 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 MIR4737-201ENST00000583979 81 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 CR381572.2-201ENST00000624852 397 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 SMG1P4-204ENST00000523028 4131 ntBASIC5.09□□□□□ -1.59
SCUBE3Q8IX30 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
SCUBE3Q8IX30 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.6
SCUBE3Q8IX30 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCUBE3Q8IX30 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SCUBE3Q8IX30 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 SMG1P6-201ENST00000532337 2930 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 MFSD8-216ENST00000641147 4009 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AC079741.1-201ENST00000321498 212 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 RNU1-62P-201ENST00000362599 164 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 Y_RNA.393-201ENST00000383936 102 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 SNORA72.4-201ENST00000384174 132 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 RNU6-1228P-201ENST00000391014 107 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 RPL26P27-201ENST00000414397 437 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 YPEL5P1-201ENST00000419731 367 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 OR2AH1P-201ENST00000425717 928 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 HMGB1P37-201ENST00000439613 609 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 HMGB3P8-201ENST00000449709 577 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AC146507.2-201ENST00000460608 476 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 RN7SL354P-201ENST00000469282 294 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 RNA5SP249-201ENST00000516127 99 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AC093249.4-201ENST00000564755 259 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AC022726.1-201ENST00000587475 207 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 MIR6780A-201ENST00000615089 68 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 AL445567.2-201ENST00000618935 498 ntBASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SCUBE3Q8IX30 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms