Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VARS2Q5ST30 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARS2Q5ST30 RNU6-979P-201ENST00000383896 107 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 RPL7AP49-201ENST00000429522 581 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 AL591438.1-201ENST00000433508 581 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 RPL19P16-201ENST00000433839 588 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 AF228730.3-201ENST00000436691 102 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 AL359073.1-201ENST00000448036 403 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 AC140172.1-201ENST00000502928 141 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 RNA5SP154-201ENST00000516193 111 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 RNA5SP153-201ENST00000516498 76 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 RNA5SP43-201ENST00000516559 110 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 snoU109.6-201ENST00000516831 118 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 RN7SKP289-201ENST00000517244 295 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 IGKV3-31-201ENST00000523109 329 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 AL110118.1-201ENST00000553543 400 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 AC019159.1-201ENST00000605094 187 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 AL021707.8-201ENST00000609428 183 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 AL138880.2-201ENST00000616214 239 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 AC026523.2-201ENST00000625039 7739 ntBASIC5.44□□□□□ -1.54
VARS2Q5ST30 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VARS2Q5ST30 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARS2Q5ST30 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.44□□□□□ -1.54
VARS2Q5ST30 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARS2Q5ST30 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARS2Q5ST30 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VARS2Q5ST30 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VARS2Q5ST30 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VARS2Q5ST30 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
VARS2Q5ST30 SNORD56.1-201ENST00000362913 68 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 Y_RNA.290-201ENST00000364879 114 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 MIR544A-201ENST00000384855 91 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 MIR624-201ENST00000385217 97 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 MIR320B2-201ENST00000408479 138 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 AC002075.2-201ENST00000425207 252 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 AC005300.1-201ENST00000428401 373 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 NDUFB4P6-201ENST00000436819 366 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 snoU13.3-201ENST00000459441 104 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 AC020895.1-201ENST00000595362 272 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 AC097639.2-201ENST00000603159 172 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VARS2Q5ST30 AC015914.2-201ENST00000618167 288 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 MIR6839-201ENST00000620425 113 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VARS2Q5ST30 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VARS2Q5ST30 AP001029.2-203ENST00000589795 4910 ntBASIC5.43□□□□□ -1.54
VARS2Q5ST30 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VARS2Q5ST30 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
VARS2Q5ST30 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 SMG1P6-201ENST00000532337 2930 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 RN7SKP113-201ENST00000363891 295 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 RNA5SP223-201ENST00000365174 120 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 RN7SKP27-201ENST00000410684 333 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 BX323845.1-201ENST00000432417 179 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 AL354714.3-201ENST00000447284 493 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 IGHV5-78-201ENST00000450948 295 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 RN7SL443P-201ENST00000464331 290 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 IGLV2-34-201ENST00000490007 283 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 AC078817.1-201ENST00000492623 435 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 SNORA18.4-201ENST00000516440 124 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 PARP1P2-201ENST00000556806 195 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 MED28P6-201ENST00000558776 231 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 CYCSP39-201ENST00000565821 309 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 MIR4270-201ENST00000581799 70 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 5S_rRNA.11-201ENST00000618635 84 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 MIR6758-201ENST00000620653 63 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms