RNA–Protein interactions for RNA: ENST00000558776.1

MED28P6-201, Transcript of mediator complex subunit 28 pseudogene 6, humanhuman

BASIC

Gene MED28P6, Length 231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28P6-201ENST00000558776 AEBP2Q6ZN18 517 aaPredicted RBP12.82□□□□□ -0.36
MED28P6-201ENST00000558776 CHIC1Q5VXU3 224 aa12.02□□□□□ -0.49
MED28P6-201ENST00000558776 POTEDQ86YR6 584 aa11.17□□□□□ -0.62
MED28P6-201ENST00000558776 SENP3Q9H4L4 574 aaPredicted RBP11.11□□□□□ -0.63
MED28P6-201ENST00000558776 PHF23Q9BUL5 403 aaPredicted RBP10.83□□□□□ -0.68
MED28P6-201ENST00000558776 FOXD1Q16676 465 aa10.42□□□□□ -0.74
MED28P6-201ENST00000558776 MSH5O43196 834 aa10.1□□□□□ -0.79
MED28P6-201ENST00000558776 PIAS4Q8N2W9 510 aaPredicted RBP9.56□□□□□ -0.88
MED28P6-201ENST00000558776 PLPPR3Q6T4P5 718 aa9.4□□□□□ -0.9
MED28P6-201ENST00000558776 CACNB1Q02641 598 aaPredicted RBP9.14□□□□□ -0.95
MED28P6-201ENST00000558776 PPP6R1Q9UPN7 881 aa9.11□□□□□ -0.95
MED28P6-201ENST00000558776 ADRA2BP18089 450 aa9.04□□□□□ -0.96
MED28P6-201ENST00000558776 EHMT2Q96KQ7 1210 aa8.89□□□□□ -0.99
MED28P6-201ENST00000558776 KCNA4P22459 653 aa8.77□□□□□ -1.01
MED28P6-201ENST00000558776 DMRT2Q9Y5R5 561 aa8.67□□□□□ -1.02
MED28P6-201ENST00000558776 POTEHQ6S545 545 aa8.61□□□□□ -1.03
MED28P6-201ENST00000558776 MAPK8IP2Q13387 824 aaPredicted RBP8.53□□□□□ -1.04
MED28P6-201ENST00000558776 RNF39Q9H2S5 420 aa8.51□□□□□ -1.05
MED28P6-201ENST00000558776 CSRNP3Q8WYN3 585 aa8.49□□□□□ -1.05
MED28P6-201ENST00000558776 SLC4A1APQ9BWU0 796 aaKnown RBP8.49□□□□□ -1.05
MED28P6-201ENST00000558776 DCAF8L1A6NGE4 600 aa8.36□□□□□ -1.07
MED28P6-201ENST00000558776 C1QBPQ07021 282 aaKnown RBP8.36□□□□□ -1.07
MED28P6-201ENST00000558776 PPP4R3CPQ6ZMV5 832 aa8.34□□□□□ -1.07
MED28P6-201ENST00000558776 NCBP3Q53F19 620 aaKnown RBP8.33□□□□□ -1.08
MED28P6-201ENST00000558776 SCAF1Q9H7N4 1312 aaKnown RBP8.32□□□□□ -1.08
MED28P6-201ENST00000558776 NPM3O75607 178 aaKnown RBP8.15□□□□□ -1.1
MED28P6-201ENST00000558776 SLC24A1O60721 1099 aa8.14□□□□□ -1.11
MED28P6-201ENST00000558776 ZBTB22O15209 634 aa8.04□□□□□ -1.12
MED28P6-201ENST00000558776 HOXD11P31277 338 aaPredicted RBP8.04□□□□□ -1.12
MED28P6-201ENST00000558776 AMER1Q5JTC6 1135 aaPredicted RBP8.01□□□□□ -1.13
MED28P6-201ENST00000558776 CNKSR2Q8WXI2 1034 aa7.99□□□□□ -1.13
MED28P6-201ENST00000558776 RTN4Q9NQC3 1192 aaKnown RBP7.96□□□□□ -1.14
MED28P6-201ENST00000558776 DNAJC5BQ9UF47 199 aa7.95□□□□□ -1.14
MED28P6-201ENST00000558776 FOXD4L1Q9NU39 408 aa7.94□□□□□ -1.14
MED28P6-201ENST00000558776 RNF216Q9NWF9 866 aaPredicted RBP7.78□□□□□ -1.16
MED28P6-201ENST00000558776 DSG3P32926 999 aa7.71□□□□□ -1.18
MED28P6-201ENST00000558776 SP7Q8TDD2 431 aaPredicted RBP7.71□□□□□ -1.18
MED28P6-201ENST00000558776 FKBP8Q14318 412 aa7.68□□□□□ -1.18
MED28P6-201ENST00000558776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.67□□□□□ -1.18
MED28P6-201ENST00000558776 ATXN8OSP0DMR3 200 aa7.61□□□□□ -1.19
MED28P6-201ENST00000558776 CAPN15O75808 1086 aa7.57□□□□□ -1.2
MED28P6-201ENST00000558776 MYCNP04198 464 aaPredicted RBP7.55□□□□□ -1.2
MED28P6-201ENST00000558776 SLC4A2P04920 1241 aa7.54□□□□□ -1.2
MED28P6-201ENST00000558776 CHRDL2Q6WN34 429 aa7.54□□□□□ -1.2
MED28P6-201ENST00000558776 SPINK5Q9NQ38 1064 aaPredicted RBP7.52□□□□□ -1.21
MED28P6-201ENST00000558776 PLSCR2Q9NRY7 297 aa7.43□□□□□ -1.22
MED28P6-201ENST00000558776 RBM42Q9BTD8 480 aaKnown RBP7.41□□□□□ -1.22
MED28P6-201ENST00000558776 U3KPZ7 1027 aaPredicted RBP7.4□□□□□ -1.22
MED28P6-201ENST00000558776 PLCB2Q00722 1185 aa7.34□□□□□ -1.23
MED28P6-201ENST00000558776 ABCB7O75027 752 aa7.3□□□□□ -1.24
MED28P6-201ENST00000558776 FBXO3Q9UK99 471 aa7.28□□□□□ -1.24
MED28P6-201ENST00000558776 HAX1O00165 279 aa7.27□□□□□ -1.25
MED28P6-201ENST00000558776 HAP1P54257 671 aaPredicted RBP7.27□□□□□ -1.25
MED28P6-201ENST00000558776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.25□□□□□ -1.25
MED28P6-201ENST00000558776 TRHP20396 242 aaPredicted RBP7.25□□□□□ -1.25
MED28P6-201ENST00000558776 HNRNPUL2Q1KMD3 747 aaKnown RBP7.25□□□□□ -1.25
MED28P6-201ENST00000558776 BCANQ96GW7 911 aa7.25□□□□□ -1.25
MED28P6-201ENST00000558776 ATF5Q9Y2D1 282 aaPredicted RBP7.25□□□□□ -1.25
MED28P6-201ENST00000558776 SAMD1Q6SPF0 538 aaPredicted RBP7.24□□□□□ -1.25
MED28P6-201ENST00000558776 ZNF219Q9P2Y4 722 aaPredicted RBP7.24□□□□□ -1.25
MED28P6-201ENST00000558776 DCAF8L2P0C7V8 631 aa7.21□□□□□ -1.26
MED28P6-201ENST00000558776 LHX8Q68G74 356 aa7.21□□□□□ -1.26
MED28P6-201ENST00000558776 PIP4P2Q8N4L2 257 aa7.19□□□□□ -1.26
MED28P6-201ENST00000558776 APLP2Q06481 763 aa7.17□□□□□ -1.26
MED28P6-201ENST00000558776 VSIG10Q8N0Z9 540 aa7.16□□□□□ -1.26
MED28P6-201ENST00000558776 PRKCSHP14314 528 aaPredicted RBP7.15□□□□□ -1.26
MED28P6-201ENST00000558776 TAOK2Q9UL54 1235 aa7.15□□□□□ -1.26
MED28P6-201ENST00000558776 SPDYE4A6NLX3 237 aa7.14□□□□□ -1.27
MED28P6-201ENST00000558776 VASPP50552 380 aaPredicted RBP7.13□□□□□ -1.27
MED28P6-201ENST00000558776 EVX2Q03828 476 aa7.08□□□□□ -1.28
MED28P6-201ENST00000558776 AKT1S1Q96B36 256 aa7.06□□□□□ -1.28
MED28P6-201ENST00000558776 IFNLR1Q8IU57 520 aaPredicted RBP7.05□□□□□ -1.28
MED28P6-201ENST00000558776 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.05□□□□□ -1.28
MED28P6-201ENST00000558776 TPRNQ4KMQ1 711 aa7.04□□□□□ -1.28
MED28P6-201ENST00000558776 PROM2Q8N271 834 aa7.04□□□□□ -1.28
MED28P6-201ENST00000558776 PKD2Q13563 968 aa7.03□□□□□ -1.28
MED28P6-201ENST00000558776 FXR2P51116 673 aaKnown RBP eCLIP7.02□□□□□ -1.29
MED28P6-201ENST00000558776 BBXQ8WY36 941 aaPredicted RBP7.01□□□□□ -1.29
MED28P6-201ENST00000558776 FBLN2P98095 1184 aa7□□□□□ -1.29
MED28P6-201ENST00000558776 PAXIP1Q6ZW49 1069 aaPredicted RBP6.98□□□□□ -1.29
MED28P6-201ENST00000558776 MKRN4PQ13434 485 aaPredicted RBP6.97□□□□□ -1.29
MED28P6-201ENST00000558776 REM2Q8IYK8 340 aaPredicted RBP6.97□□□□□ -1.29
MED28P6-201ENST00000558776 KDM2AQ9Y2K7 1162 aa6.97□□□□□ -1.29
MED28P6-201ENST00000558776 CFAP44Q96MT7 982 aa6.96□□□□□ -1.3
MED28P6-201ENST00000558776 ECM2O94769 699 aaPredicted RBP6.93□□□□□ -1.3
MED28P6-201ENST00000558776 KLHL34Q8N239 644 aa6.92□□□□□ -1.3
MED28P6-201ENST00000558776 SPOCK2Q92563 424 aa6.92□□□□□ -1.3
MED28P6-201ENST00000558776 PITPNM1O00562 1244 aa6.91□□□□□ -1.3
MED28P6-201ENST00000558776 GABBR2O75899 941 aa6.91□□□□□ -1.3
MED28P6-201ENST00000558776 SPRYD3Q8NCJ5 442 aa6.9□□□□□ -1.3
MED28P6-201ENST00000558776 NPM1P06748 294 aaKnown RBP eCLIP6.88□□□□□ -1.31
MED28P6-201ENST00000558776 POLA2Q14181 598 aa6.88□□□□□ -1.31
MED28P6-201ENST00000558776 TSHZ2Q9NRE2 1034 aa6.85□□□□□ -1.31
MED28P6-201ENST00000558776 POTEMA6NI47 508 aa6.84□□□□□ -1.31
MED28P6-201ENST00000558776 NBR1Q14596 966 aa6.84□□□□□ -1.31
MED28P6-201ENST00000558776 C19orf67A6NJJ6 358 aa6.82□□□□□ -1.32
MED28P6-201ENST00000558776 RGL2O15211 777 aa6.81□□□□□ -1.32
MED28P6-201ENST00000558776 PCDH10Q9P2E7 1040 aa6.8□□□□□ -1.32
MED28P6-201ENST00000558776 STAG3Q9UJ98 1225 aa6.8□□□□□ -1.32
MED28P6-201ENST00000558776 PLCD3Q8N3E9 789 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms