Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MIR1283-1-201ENST00000408494 87 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 AC113412.1-201ENST00000425840 504 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 YME1L1P1-201ENST00000429435 297 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 AC023141.3-201ENST00000436698 278 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 RN7SL738P-201ENST00000470264 297 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 RN7SL170P-201ENST00000487098 295 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 AC090958.1-201ENST00000511122 351 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 AC011944.2-201ENST00000624440 683 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 MIR203B-201ENST00000636080 86 ntBASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.36□□□□□ -1.55
MS4A3Q96HJ5 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RNU6-438P-201ENST00000365561 103 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 Y_RNA.467-201ENST00000384297 102 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RNU6-987P-201ENST00000384759 104 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 MIR605-201ENST00000385078 83 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 SDHCP2-201ENST00000398565 501 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 MIR300-201ENST00000401138 83 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RNA5SP156-201ENST00000410250 110 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RN7SKP156-201ENST00000410308 342 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RNU2-40P-201ENST00000410833 196 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RN7SKP17-201ENST00000411242 351 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RNF10P1-201ENST00000418589 369 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 LINC02210-201ENST00000444561 288 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 AL049873.1-201ENST00000480540 376 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 LSM3P4-201ENST00000502948 309 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RNU6-539P-201ENST00000516665 103 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RN7SKP35-201ENST00000517210 151 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RNA5SP108-201ENST00000605921 117 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 AC118658.2-201ENST00000618697 459 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 MIR1255B1-201ENST00000636325 63 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 AC010266.2-201ENST00000564741 3255 ntBASIC5.35□□□□□ -1.55
MS4A3Q96HJ5 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 AC004944.1-201ENST00000517807 3059 ntBASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 SNORA21-201ENST00000362423 132 ntBASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 FTLP19-201ENST00000433300 394 ntBASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 RPS29P20-201ENST00000489592 171 ntBASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 RNU2-35P-201ENST00000516446 142 ntBASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 AP001880.2-201ENST00000538233 448 ntBASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 AC138965.3-201ENST00000623875 498 ntBASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
MS4A3Q96HJ5 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
MS4A3Q96HJ5 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.34□□□□□ -1.56
MS4A3Q96HJ5 AL139811.1-201ENST00000424779 2299 ntBASIC5.34□□□□□ -1.56
MS4A3Q96HJ5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 RNU1-134P-201ENST00000362935 165 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 U3.10-201ENST00000364459 214 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 RNU6-1189P-201ENST00000383958 107 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 Y_RNA.430-201ENST00000384081 110 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 RNU6-1181P-201ENST00000384191 106 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 RPL30P4-201ENST00000429309 333 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 RPS27P22-201ENST00000478056 241 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 KRTAP13-6P-201ENST00000508999 371 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 RNU5F-4P-201ENST00000516581 114 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 RNA5SP434-201ENST00000516647 121 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 AC107958.1-201ENST00000556576 290 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 MIR4753-201ENST00000585119 83 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 AC008507.4-201ENST00000585464 127 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 AC020916.2-201ENST00000591242 360 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 AC069200.1-201ENST00000609511 323 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 FAS-AS1.1-201ENST00000615327 126 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 AP001052.1-201ENST00000626421 99 ntBASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
MS4A3Q96HJ5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms