Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA3O60609 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
GFRA3O60609 RNU6-527P-201ENST00000363425 104 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 RNU6-1285P-201ENST00000363480 105 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
GFRA3O60609 RNU6-821P-201ENST00000390995 107 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 ENSAP1-201ENST00000392855 326 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 RN7SKP17-201ENST00000411242 351 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 AL513331.1-201ENST00000411908 397 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 AC002075.2-201ENST00000425207 252 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 FABP5P15-201ENST00000453566 214 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.87□□□□□ -1.63
GFRA3O60609 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.87□□□□□ -1.63
GFRA3O60609 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.87□□□□□ -1.63
GFRA3O60609 snoU13.6-201ENST00000458785 104 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 AC078817.1-201ENST00000492623 435 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 AC005921.1-201ENST00000510589 286 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 TOMM22P4-201ENST00000511318 336 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 RNU6-1095P-201ENST00000516148 108 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 IGKV3-31-201ENST00000523109 329 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA3O60609 AC091979.2-201ENST00000607514 214 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.87□□□□□ -1.63
GFRA3O60609 AL034549.2-201ENST00000618285 3373 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA3O60609 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.87□□□□□ -1.63
GFRA3O60609 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA3O60609 AC025031.4-201ENST00000621248 3271 ntBASIC4.87□□□□□ -1.63
GFRA3O60609 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA3O60609 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA3O60609 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
GFRA3O60609 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
GFRA3O60609 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA3O60609 RNU1-136P-201ENST00000384181 164 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 SNORA36A-201ENST00000384221 132 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 RNU6-72P-201ENST00000384285 79 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 MIR634-201ENST00000385208 97 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 RNA5SP317-201ENST00000410176 116 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 RNU2-55P-201ENST00000411146 174 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 RNA5SP311-201ENST00000411290 116 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.86□□□□□ -1.63
GFRA3O60609 RPS20P14-201ENST00000412545 360 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
GFRA3O60609 RNA5SP57-201ENST00000459463 123 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 AC091912.1-201ENST00000511351 248 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA3O60609 RNA5SP315-201ENST00000516340 116 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 RNA5SP312-201ENST00000517068 116 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 SNORA31.19-201ENST00000517079 126 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA3O60609 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.86□□□□□ -1.63
GFRA3O60609 AC069200.1-201ENST00000609511 323 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 SNX18P1Y-201ENST00000616231 511 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 AC000095.2-202ENST00000637415 154 ntBASIC4.86□□□□□ -1.63
GFRA3O60609 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.86□□□□□ -1.63
GFRA3O60609 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
GFRA3O60609 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA3O60609 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA3O60609 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA3O60609 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA3O60609 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA3O60609 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.86□□□□□ -1.63
GFRA3O60609 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.85□□□□□ -1.63
GFRA3O60609 AL121839.2-201ENST00000565058 6943 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
GFRA3O60609 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.85□□□□□ -1.63
GFRA3O60609 SPRR2C-201ENST00000290702 219 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 Y_RNA.565-201ENST00000384719 101 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 MIR200C-201ENST00000384980 68 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 RNU11-201ENST00000387069 134 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 Y_RNA.587-201ENST00000391210 103 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.85□□□□□ -1.63
GFRA3O60609 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.85□□□□□ -1.63
GFRA3O60609 RN7SL188P-201ENST00000469842 285 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 RPL31P13-201ENST00000484151 370 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.85□□□□□ -1.63
GFRA3O60609 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.85□□□□□ -1.63
GFRA3O60609 AL360012.1-201ENST00000602813 131 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 AL591034.3-201ENST00000605511 685 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 AL355834.1-201ENST00000556602 3965 ntBASIC4.85□□□□□ -1.63
GFRA3O60609 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.85□□□□□ -1.63
GFRA3O60609 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA3O60609 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA3O60609 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA3O60609 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
GFRA3O60609 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GFRA3O60609 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.84□□□□□ -1.63
GFRA3O60609 Y_RNA.111-201ENST00000363248 100 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms