Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
GFRA3O60609 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GFRA3O60609 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
GFRA3O60609 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GFRA3O60609 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GFRA3O60609 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.9□□□□□ -1.62
GFRA3O60609 AL359955.1-201ENST00000455242 3275 ntBASIC4.9□□□□□ -1.62
GFRA3O60609 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
GFRA3O60609 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
GFRA3O60609 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA3O60609 Y_RNA.52-201ENST00000362760 96 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 Y_RNA.362-201ENST00000365518 110 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 RNU1-74P-201ENST00000384108 171 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 MIR181B1-201ENST00000385240 110 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA3O60609 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.9□□□□□ -1.63
GFRA3O60609 UQCRHP4-201ENST00000471686 272 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 TRBV5-2-201ENST00000489095 273 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 RNU1-104P-201ENST00000517280 175 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA3O60609 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.9□□□□□ -1.63
GFRA3O60609 IPO5P1-202ENST00000600039 287 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 AL133481.2-203ENST00000607558 139 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 AC114781.5-201ENST00000615297 108 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 U6.115-201ENST00000636045 103 ntBASIC4.9□□□□□ -1.63
GFRA3O60609 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.9□□□□□ -1.63
GFRA3O60609 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.9□□□□□ -1.63
GFRA3O60609 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.9□□□□□ -1.63
GFRA3O60609 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.9□□□□□ -1.63
GFRA3O60609 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GFRA3O60609 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
GFRA3O60609 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.9□□□□□ -1.63
GFRA3O60609 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
GFRA3O60609 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA3O60609 AC020633.1-201ENST00000468439 2247 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA3O60609 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.89□□□□□ -1.63
GFRA3O60609 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
GFRA3O60609 AC116096.1-201ENST00000566804 2314 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA3O60609 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
GFRA3O60609 RNU6-1155P-201ENST00000363554 107 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 RNU6-484P-201ENST00000384016 107 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 RNA5SP397-201ENST00000391323 118 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 RPL11P3-201ENST00000395256 523 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 RNU2-43P-201ENST00000410306 190 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 RN7SKP177-201ENST00000410567 355 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.89□□□□□ -1.63
GFRA3O60609 RNU6-1218P-201ENST00000458990 108 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 GLUD1P3-202ENST00000508551 200 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 GMPSP1-201ENST00000514075 579 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 AL160236.1-201ENST00000556317 195 ntBASIC4.89□□□□□ -1.63
GFRA3O60609 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
GFRA3O60609 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA3O60609 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA3O60609 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA3O60609 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA3O60609 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
GFRA3O60609 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GFRA3O60609 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.89□□□□□ -1.63
GFRA3O60609 AP002512.4-202ENST00000641599 4530 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.88□□□□□ -1.63
GFRA3O60609 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA3O60609 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.88□□□□□ -1.63
GFRA3O60609 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA3O60609 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
GFRA3O60609 SNORA63.1-201ENST00000362493 131 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 SNORA36C-201ENST00000384289 132 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 RNU1-13P-201ENST00000384499 162 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 SNORD56.6-201ENST00000384569 71 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 SNORA48.5-201ENST00000391143 135 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 MIR891A-201ENST00000401237 79 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 AL391219.1-201ENST00000422570 483 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.88□□□□□ -1.63
GFRA3O60609 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA3O60609 AP000705.1-201ENST00000454567 350 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 AC090515.1-201ENST00000465295 476 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA3O60609 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
GFRA3O60609 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.88□□□□□ -1.63
GFRA3O60609 RN7SKP57-201ENST00000517248 293 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.88□□□□□ -1.63
GFRA3O60609 AC122688.1-201ENST00000541494 223 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA3O60609 AL137843.1-201ENST00000605078 385 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA3O60609 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA3O60609 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA3O60609 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.88□□□□□ -1.63
GFRA3O60609 ADAM24P-201ENST00000398655 2101 ntBASIC4.88□□□□□ -1.63
GFRA3O60609 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GFRA3O60609 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.88□□□□□ -1.63
GFRA3O60609 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA3O60609 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA3O60609 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.87□□□□□ -1.63
GFRA3O60609 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA3O60609 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
GFRA3O60609 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms