Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 AC009779.6-201ENST00000603972 165 ntBASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 HSPE1P7-201ENST00000604681 321 ntBASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 AL365434.2-201ENST00000607979 234 ntBASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 AC098479.1-201ENST00000609225 154 ntBASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VRTNQ9H8Y1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 AC110491.1-201ENST00000562191 2010 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 Y_RNA.16-201ENST00000362421 102 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 RNU5B-2P-201ENST00000363036 113 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 RNU6-926P-201ENST00000384075 107 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 RNU6-318P-201ENST00000384283 103 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 RNA5SP36-201ENST00000410197 133 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 BPY2DP-201ENST00000422208 265 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 AL356387.2-201ENST00000422272 243 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 snoU13.28-201ENST00000459235 104 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 BTF3L4P4-201ENST00000506381 449 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 RNU5B-3P-201ENST00000516601 115 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 SNORA31.23-201ENST00000517219 133 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 AC021739.1-201ENST00000559631 174 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 BX284668.6-201ENST00000606899 438 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 SNORA43.4-201ENST00000629559 138 ntBASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VRTNQ9H8Y1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC068254.2-201ENST00000623938 3577 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 Y_RNA.541-201ENST00000384640 113 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 SUMO1P3-201ENST00000439961 304 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 GPM6BP3-201ENST00000442797 145 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC108022.1-201ENST00000493466 478 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 GZMAP1-201ENST00000503054 631 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC016632.1-201ENST00000503994 196 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 Y_RNA.700-201ENST00000516806 100 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 SCARNA24.2-201ENST00000516968 130 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC009163.5-201ENST00000575421 637 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC008745.1-201ENST00000604064 271 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC010201.1-201ENST00000605051 540 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC005296.1-201ENST00000616145 209 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC005086.4-201ENST00000623065 213 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 AC091905.2-201ENST00000623143 306 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 MIR3199-2-201ENST00000636243 86 ntBASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.8□□□□□ -1.64
VRTNQ9H8Y1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 RNU6-1141P-201ENST00000364520 107 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 Y_RNA.277-201ENST00000364754 102 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 RNU1-63P-201ENST00000383902 164 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 SNORD63-201ENST00000384262 68 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 Y_RNA.785-201ENST00000384290 109 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 RNA5SP213-201ENST00000391031 106 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 SNORD58.1-201ENST00000391313 66 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 RPS12P10-201ENST00000427031 377 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 snoU13.1-201ENST00000459157 104 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 MED28P2-201ENST00000475771 317 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 RPS4XP22-201ENST00000480755 780 ntBASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.79□□□□□ -1.64
VRTNQ9H8Y1 MFSD8-242ENST00000641690 4199 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms