Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RNU6-622P-201ENST00000384272 103 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 SNORA11.5-201ENST00000408163 128 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-55P-201ENST00000411092 107 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 AC138623.1-201ENST00000418060 216 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 AL358232.1-201ENST00000448030 501 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 Y_RNA.639-201ENST00000458981 102 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 AL049830.2-201ENST00000480072 201 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-470P-201ENST00000515954 104 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-976P-201ENST00000516086 111 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 SCARNA16.2-201ENST00000516520 172 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 AC099654.7-201ENST00000635788 2127 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-490P-201ENST00000362985 107 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 SNORD114-19-201ENST00000363072 75 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 Y_RNA.123-201ENST00000363338 102 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 U3.6-201ENST00000363622 211 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-1141P-201ENST00000364520 107 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU1-140P-201ENST00000365040 165 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 RPL39P29-201ENST00000447779 157 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 RNA5SP384-201ENST00000516615 116 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AC109329.1-201ENST00000518744 317 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AC115990.1-201ENST00000526957 301 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AL591424.2-201ENST00000617023 128 ntBASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
GTF3C3Q9Y5Q9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 BX276092.3-201ENST00000424182 230 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AL591419.1-201ENST00000427423 339 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AC078809.1-201ENST00000427601 140 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AC144530.1-201ENST00000452862 555 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AC103987.1-201ENST00000473394 348 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 RPL22P13-201ENST00000493291 347 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 MIR5696-201ENST00000578474 85 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 MIR4425-201ENST00000580572 84 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 RPS15AP11-201ENST00000594193 385 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AC012493.2-201ENST00000595083 291 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 SNORA51-201ENST00000606420 132 ntBASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
GTF3C3Q9Y5Q9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 ZNF299P-201ENST00000406845 1804 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 MTND4P27-201ENST00000450813 1354 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 RN7SKP293-201ENST00000411389 296 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC009414.1-201ENST00000427200 443 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC004383.1-201ENST00000438135 289 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC016831.4-201ENST00000438302 307 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 RPS18P6-201ENST00000476880 458 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC104564.1-201ENST00000493028 407 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC016256.1-201ENST00000547971 354 ntBASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
GTF3C3Q9Y5Q9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
GTF3C3Q9Y5Q9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC5.33□□□□□ -1.56
GTF3C3Q9Y5Q9 MIR369-201ENST00000362155 70 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms