Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 SNORA43.4-201ENST00000629559 138 ntBASIC5.59□□□□□ -1.51
PNMA3Q9UL41 AL034408.1-202ENST00000636088 415 ntBASIC5.59□□□□□ -1.51
PNMA3Q9UL41 OR56B2P-202ENST00000641377 2453 ntBASIC5.59□□□□□ -1.51
PNMA3Q9UL41 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PNMA3Q9UL41 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
PNMA3Q9UL41 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.59□□□□□ -1.52
PNMA3Q9UL41 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PNMA3Q9UL41 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PNMA3Q9UL41 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 Y_RNA.337-201ENST00000365312 102 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 U3.37-201ENST00000408528 213 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 RNU6-1199P-201ENST00000411249 104 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 AC138623.1-201ENST00000418060 216 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 TDGF1P1-201ENST00000445734 527 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 AL357134.1-201ENST00000445848 426 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 AL589765.3-201ENST00000446084 462 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 AC006026.2-201ENST00000457376 180 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 RNU6-155P-201ENST00000516347 100 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 RNU6-1256P-201ENST00000516539 103 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 CYCSP23-201ENST00000519781 313 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 AL121932.1-201ENST00000605542 214 ntBASIC5.58□□□□□ -1.52
PNMA3Q9UL41 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.58□□□□□ -1.52
PNMA3Q9UL41 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 AC005005.4-201ENST00000623789 16698 ntBASIC5.57□□□□□ -1.52
PNMA3Q9UL41 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 ENPP7P11-201ENST00000505915 627 ntBASIC5.57□□□□□ -1.52
PNMA3Q9UL41 RN7SKP179-201ENST00000516126 217 ntBASIC5.57□□□□□ -1.52
PNMA3Q9UL41 AC115990.1-201ENST00000526957 301 ntBASIC5.57□□□□□ -1.52
PNMA3Q9UL41 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 AC107016.1-201ENST00000550463 337 ntBASIC5.57□□□□□ -1.52
PNMA3Q9UL41 AL356157.2-201ENST00000605122 111 ntBASIC5.57□□□□□ -1.52
PNMA3Q9UL41 AC069294.1-201ENST00000608397 350 ntBASIC5.57□□□□□ -1.52
PNMA3Q9UL41 AC004467.1-201ENST00000615678 330 ntBASIC5.57□□□□□ -1.52
PNMA3Q9UL41 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
PNMA3Q9UL41 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 RN7SKP267-201ENST00000410381 285 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 RNU6-1245P-201ENST00000411130 106 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 RNA5SP31-201ENST00000411144 127 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 AC007919.1-201ENST00000429380 217 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 RPL12P46-201ENST00000436610 195 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 EIF4A1P11-201ENST00000451239 222 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 RPS17P2-201ENST00000461663 408 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 RPL21P126-201ENST00000470049 478 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 AC018448.1-201ENST00000552843 316 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 MIR5571-201ENST00000577998 113 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 MIR5699-201ENST00000578903 90 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 AC091932.3-201ENST00000624223 323 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 CUL1P1-201ENST00000509510 2425 ntBASIC5.56□□□□□ -1.52
PNMA3Q9UL41 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PNMA3Q9UL41 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 RNU6-873P-201ENST00000363833 107 ntBASIC5.55□□□□□ -1.52
PNMA3Q9UL41 Y_RNA.309-201ENST00000365046 111 ntBASIC5.55□□□□□ -1.52
PNMA3Q9UL41 RNU6-1144P-201ENST00000384247 104 ntBASIC5.55□□□□□ -1.52
PNMA3Q9UL41 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PNMA3Q9UL41 RNU2-68P-201ENST00000410878 191 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms