Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC006445.1-201ENST00000491925 405 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL776P-201ENST00000493390 268 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC006070.1-201ENST00000508151 193 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 APOBEC3AP1-201ENST00000511396 287 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-1206P-201ENST00000516339 103 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-656P-201ENST00000516785 107 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-711P-201ENST00000517255 106 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC044836.1-201ENST00000519514 274 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CYCSP38-201ENST00000559840 322 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR3137-201ENST00000577367 75 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR3923-201ENST00000579521 83 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR3663-201ENST00000583207 97 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR3117-201ENST00000584034 78 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC020914.7-201ENST00000594477 545 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC103810.8-201ENST00000607347 118 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MIR6883-201ENST00000614952 78 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC105081.1-201ENST00000617727 106 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC005086.4-201ENST00000623065 213 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC009093.8-201ENST00000641769 292 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC079753.1-201ENST00000623243 3868 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC010329.1-201ENST00000593903 8328 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CTNNA1P1-201ENST00000515849 2728 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 AP003119.3-201ENST00000566747 4192 ntBASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 MAPK10-323ENST00000641493 3207 ntBASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 AC007159.1-201ENST00000566529 4706 ntBASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KRTAP4-4Q9BYR3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms