Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
PRDM9Q9NQV7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRDM9Q9NQV7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
PRDM9Q9NQV7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
PRDM9Q9NQV7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.01□□□□□ -1.61
PRDM9Q9NQV7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PRDM9Q9NQV7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 AC090971.4-201ENST00000560291 1800 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 MIR544A-201ENST00000384855 91 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 MIR223-201ENST00000385204 110 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 RNU6-1228P-201ENST00000391014 107 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 RPS20P14-201ENST00000412545 360 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 RPL26P27-201ENST00000414397 437 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 HMGB1P37-201ENST00000439613 609 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 UQCRHP4-201ENST00000471686 272 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 RN7SL177P-201ENST00000476596 299 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 RNU6-772P-201ENST00000516042 105 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 RNA5SP34-201ENST00000516887 130 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 SNORA31.20-201ENST00000517111 133 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 Y_RNA.757-201ENST00000578934 114 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 AL359198.2-201ENST00000611836 194 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 AP001005.3-201ENST00000622049 129 ntBASIC5□□□□□ -1.61
PRDM9Q9NQV7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PRDM9Q9NQV7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRDM9Q9NQV7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AC068700.1-201ENST00000565862 3754 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AC126755.2-208ENST00000327792 462 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AC138969.1-213ENST00000331436 462 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 Y_RNA.24-201ENST00000362508 103 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AL078599.1-201ENST00000402075 293 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 MIR320B2-201ENST00000408479 138 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 COX5BP7-201ENST00000414780 274 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AC244670.1-201ENST00000436879 112 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AL591623.2-201ENST00000449978 222 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AC146507.2-201ENST00000460608 476 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 SNRPGP7-201ENST00000469016 106 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 CKS1BP7-201ENST00000522230 235 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 MIR5582-201ENST00000579697 68 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 RN7SL708P-201ENST00000580952 299 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AC007448.1-201ENST00000582714 234 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 RNA5SP108-201ENST00000605921 117 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AL445567.2-201ENST00000618935 498 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 AC092376.2-201ENST00000622621 4116 ntBASIC4.99□□□□□ -1.61
PRDM9Q9NQV7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 CENPCP1-201ENST00000533085 2578 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 RNU6-728P-201ENST00000365375 104 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 Y_RNA.369-201ENST00000365568 117 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 RNU6-969P-201ENST00000383900 105 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 RNU6-171P-201ENST00000384354 107 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 MIR589-201ENST00000385238 99 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 AIMP1P2-201ENST00000425294 312 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 AC009238.2-201ENST00000431026 355 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 AC011276.1-201ENST00000469688 323 ntBASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.98□□□□□ -1.61
PRDM9Q9NQV7 RNA5SP373-201ENST00000517271 95 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms