Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 GABRG2-229ENST00000641017 3628 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RTN4Q9NQC3 RNU6-961P-201ENST00000363893 105 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 RNU6-378P-201ENST00000384324 107 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 RNU6-102P-201ENST00000384485 104 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.28□□□□□ -1.4
RTN4Q9NQC3 PSMD10P3-201ENST00000437000 448 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 AL139109.1-201ENST00000455491 297 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 DUTP1-201ENST00000493631 470 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 RPS27P26-201ENST00000494583 239 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 AC093663.1-201ENST00000497190 394 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 AC116917.1-201ENST00000520558 305 ntBASIC6.28□□□□□ -1.4
RTN4Q9NQC3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
RTN4Q9NQC3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RTN4Q9NQC3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RTN4Q9NQC3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RTN4Q9NQC3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 Y_RNA.65-201ENST00000362846 100 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 Y_RNA.117-201ENST00000363294 101 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 Y_RNA.277-201ENST00000364754 102 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 Y_RNA.331-201ENST00000365267 102 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 Y_RNA.539-201ENST00000384635 107 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 MIR130A-201ENST00000385274 89 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 POLR2KP2-201ENST00000438155 177 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 RN7SL254P-201ENST00000460609 284 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 AC103975.1-201ENST00000482506 483 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 RN7SL547P-201ENST00000490793 290 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 SNORA70.14-201ENST00000516205 110 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 IGKV3D-25-201ENST00000519599 235 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 AC096996.1-201ENST00000563813 325 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 RN7SL52P-201ENST00000584271 284 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 MIR4765-201ENST00000585007 77 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 RN7SL787P-201ENST00000613000 284 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 RN7SL544P-201ENST00000617232 284 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 RN7SL763P-201ENST00000620922 284 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 AC007546.2-201ENST00000623996 360 ntBASIC6.27□□□□□ -1.41
RTN4Q9NQC3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RTN4Q9NQC3 AL355596.1-201ENST00000565399 3996 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 AC091152.2-201ENST00000591628 2569 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 SNORA51.9-201ENST00000384295 124 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 RNU4-70P-201ENST00000384579 139 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 MIR130B-202ENST00000385018 82 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 RN7SKP146-201ENST00000410242 334 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 RNU4-30P-201ENST00000410245 143 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 AL390119.1-201ENST00000440329 312 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 AC091179.3-201ENST00000474761 144 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 RN7SL447P-201ENST00000494711 245 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 RNU6-138P-201ENST00000515952 107 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 RN7SKP35-201ENST00000517210 151 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 MZT1P2-201ENST00000604387 248 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 AL590240.4-201ENST00000616908 390 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC6.26□□□□□ -1.41
RTN4Q9NQC3 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.26□□□□□ -1.41
RTN4Q9NQC3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 RNU1-94P-201ENST00000362627 173 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 MIR29B2-201ENST00000385055 81 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 RPL23AP70-201ENST00000483361 460 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 AC145146.1-201ENST00000496370 254 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 AC134698.5-201ENST00000519444 336 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 AC008739.2-201ENST00000597006 317 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 AC025946.2-201ENST00000603398 234 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 AC022441.3-201ENST00000605737 136 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 uc_338.29-201ENST00000615099 168 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 AC132068.1-201ENST00000623805 459 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC6.25□□□□□ -1.41
RTN4Q9NQC3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.25□□□□□ -1.41
RTN4Q9NQC3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RTN4Q9NQC3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC6.24□□□□□ -1.41
RTN4Q9NQC3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms