Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA3O60609 AL590240.1-201ENST00000334118 313 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 RN7SKP280-201ENST00000364196 304 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 RNU6-979P-201ENST00000383896 107 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 AL135786.1-201ENST00000415892 214 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 RPL39P40-201ENST00000445481 146 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 AL500522.2-201ENST00000448562 343 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.02□□□□□ -1.61
GFRA3O60609 RNU7-141P-201ENST00000459304 62 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 FTH1P24-201ENST00000503502 462 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 AC006380.1-201ENST00000603598 186 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 AL022345.2-201ENST00000606307 135 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 RNU6-84P-201ENST00000607737 102 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.02□□□□□ -1.61
GFRA3O60609 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA3O60609 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA3O60609 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
GFRA3O60609 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
GFRA3O60609 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA3O60609 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
GFRA3O60609 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
GFRA3O60609 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.02□□□□□ -1.61
GFRA3O60609 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
GFRA3O60609 SMG1P7-201ENST00000565246 2704 ntBASIC5.02□□□□□ -1.61
GFRA3O60609 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
GFRA3O60609 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
GFRA3O60609 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
GFRA3O60609 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
GFRA3O60609 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
GFRA3O60609 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA3O60609 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 Y_RNA.93-201ENST00000363066 109 ntBASIC5.01□□□□□ -1.61
GFRA3O60609 RN7SKP202-201ENST00000410439 330 ntBASIC5.01□□□□□ -1.61
GFRA3O60609 RN7SKP53-201ENST00000411337 315 ntBASIC5.01□□□□□ -1.61
GFRA3O60609 CALM2P4-201ENST00000430810 426 ntBASIC5.01□□□□□ -1.61
GFRA3O60609 REREP2Y-201ENST00000439103 200 ntBASIC5.01□□□□□ -1.61
GFRA3O60609 RNU6-927P-201ENST00000516199 100 ntBASIC5.01□□□□□ -1.61
GFRA3O60609 RNU6-904P-201ENST00000516206 101 ntBASIC5.01□□□□□ -1.61
GFRA3O60609 SNORA31.9-201ENST00000516429 84 ntBASIC5.01□□□□□ -1.61
GFRA3O60609 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.01□□□□□ -1.61
GFRA3O60609 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.01□□□□□ -1.61
GFRA3O60609 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA3O60609 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA3O60609 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
GFRA3O60609 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
GFRA3O60609 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA3O60609 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA3O60609 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5□□□□□ -1.61
GFRA3O60609 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5□□□□□ -1.61
GFRA3O60609 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
GFRA3O60609 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
GFRA3O60609 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5□□□□□ -1.61
GFRA3O60609 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5□□□□□ -1.61
GFRA3O60609 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5□□□□□ -1.61
GFRA3O60609 RNU6-105P-201ENST00000363909 104 ntBASIC5□□□□□ -1.61
GFRA3O60609 SNORD113.2-201ENST00000364166 89 ntBASIC5□□□□□ -1.61
GFRA3O60609 RNA5SP90-201ENST00000364801 99 ntBASIC5□□□□□ -1.61
GFRA3O60609 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5□□□□□ -1.61
GFRA3O60609 MIR1278-201ENST00000408753 81 ntBASIC5□□□□□ -1.61
GFRA3O60609 AC112220.1-201ENST00000434628 355 ntBASIC5□□□□□ -1.61
GFRA3O60609 PHBP16-201ENST00000446318 950 ntBASIC5□□□□□ -1.61
GFRA3O60609 RN7SL542P-201ENST00000467147 294 ntBASIC5□□□□□ -1.61
GFRA3O60609 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5□□□□□ -1.61
GFRA3O60609 AL161756.2-201ENST00000604597 246 ntBASIC5□□□□□ -1.61
GFRA3O60609 ARF4P1-201ENST00000605447 541 ntBASIC5□□□□□ -1.61
GFRA3O60609 RMST_8.1-201ENST00000610287 165 ntBASIC5□□□□□ -1.61
GFRA3O60609 MIR4275-201ENST00000636486 87 ntBASIC5□□□□□ -1.61
GFRA3O60609 AC022164.1-201ENST00000568767 2673 ntBASIC5□□□□□ -1.61
GFRA3O60609 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5□□□□□ -1.61
GFRA3O60609 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
GFRA3O60609 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA3O60609 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5□□□□□ -1.61
GFRA3O60609 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5□□□□□ -1.61
GFRA3O60609 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5□□□□□ -1.61
GFRA3O60609 AL589743.1-201ENST00000551932 2712 ntBASIC5□□□□□ -1.61
GFRA3O60609 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5□□□□□ -1.61
GFRA3O60609 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA3O60609 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA3O60609 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA3O60609 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA3O60609 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
GFRA3O60609 RNU6-78P-201ENST00000362897 107 ntBASIC4.99□□□□□ -1.61
GFRA3O60609 RNA5SP326-201ENST00000363209 110 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms