Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 THAP12P5-201ENST00000405864 2275 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AL590240.1-201ENST00000334118 313 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 RNA5SP447-201ENST00000363749 119 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-339P-201ENST00000384310 107 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AL138785.1-201ENST00000425821 331 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 RPL12P46-201ENST00000436610 195 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AC009296.1-201ENST00000443146 155 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 MTATP6P7-201ENST00000453315 681 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 RNU7-197P-201ENST00000458836 62 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 RNA5SP76-201ENST00000516277 87 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-191P-201ENST00000516295 94 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AC090049.2-201ENST00000550377 109 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AC006349.1-201ENST00000555526 235 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AC023043.3-201ENST00000593113 385 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 VN1R85P-201ENST00000601587 426 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AL161629.2-201ENST00000615347 275 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AL450472.3-201ENST00000615578 367 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 CR381572.2-201ENST00000624852 397 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 AL365440.1-201ENST00000436135 2167 ntBASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NKX2-3Q8TAU0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 CTSL3P-202ENST00000412179 788 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AL451062.2-201ENST00000427515 271 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AC008065.1-201ENST00000428525 348 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 RPS27AP12-201ENST00000429552 465 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AC096638.1-201ENST00000444678 216 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 BX276092.4-201ENST00000452056 248 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 FTH1P11-201ENST00000517577 551 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AL645944.1-201ENST00000603857 493 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AP001340.1-201ENST00000624405 217 ntBASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NKX2-3Q8TAU0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 LINC01109-201ENST00000603837 3081 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 MIR412-201ENST00000362142 91 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 Y_RNA.33-201ENST00000362591 102 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 RNA5SP361-201ENST00000362686 118 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-1272P-201ENST00000362776 107 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 MIR135A2-201ENST00000384854 100 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 EIF4HP2-201ENST00000424380 563 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 AL732292.1-201ENST00000426692 226 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 AC016831.4-201ENST00000438302 307 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 AL359073.1-201ENST00000448036 403 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 RPL23AP3-201ENST00000453844 468 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 AC109327.1-201ENST00000471666 403 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 RNU6-143P-201ENST00000516942 93 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 AL672167.1-203ENST00000641299 2975 ntBASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.62□□□□□ -1.51
NKX2-3Q8TAU0 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
NKX2-3Q8TAU0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms