Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC022441.3-201ENST00000605737 136 ntBASIC4.8□□□□□ -1.64
GPC1P35052 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
GPC1P35052 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.8□□□□□ -1.64
GPC1P35052 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
GPC1P35052 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC1P35052 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GPC1P35052 AC000123.3-201ENST00000624029 4975 ntBASIC4.8□□□□□ -1.64
GPC1P35052 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.8□□□□□ -1.64
GPC1P35052 AC026951.1-201ENST00000559530 2459 ntBASIC4.8□□□□□ -1.64
GPC1P35052 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GPC1P35052 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 LINC01355-201ENST00000566551 5444 ntBASIC4.79□□□□□ -1.64
GPC1P35052 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 SAMMSON-226ENST00000642089 1582 ntBASIC4.79□□□□□ -1.64
GPC1P35052 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
GPC1P35052 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 Y_RNA.75-201ENST00000362927 97 ntBASIC4.79□□□□□ -1.64
GPC1P35052 SNORA17.1-201ENST00000362945 126 ntBASIC4.79□□□□□ -1.64
GPC1P35052 RNU4-17P-201ENST00000365598 141 ntBASIC4.79□□□□□ -1.64
GPC1P35052 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC1P35052 RNU6-741P-201ENST00000383889 107 ntBASIC4.79□□□□□ -1.64
GPC1P35052 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GPC1P35052 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC1P35052 AC138623.1-201ENST00000418060 216 ntBASIC4.79□□□□□ -1.64
GPC1P35052 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC1P35052 AL139148.1-201ENST00000427122 680 ntBASIC4.79□□□□□ -1.64
GPC1P35052 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.79□□□□□ -1.64
GPC1P35052 AC243964.1-201ENST00000441814 261 ntBASIC4.79□□□□□ -1.64
GPC1P35052 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.79□□□□□ -1.64
GPC1P35052 AL137159.1-201ENST00000452808 512 ntBASIC4.79□□□□□ -1.64
GPC1P35052 IFNWP4-201ENST00000453148 294 ntBASIC4.79□□□□□ -1.64
GPC1P35052 RPS21P4-201ENST00000487122 248 ntBASIC4.79□□□□□ -1.64
GPC1P35052 AC108145.1-201ENST00000503770 153 ntBASIC4.79□□□□□ -1.64
GPC1P35052 SNRPCP2-201ENST00000504370 475 ntBASIC4.79□□□□□ -1.64
GPC1P35052 AC020593.1-201ENST00000507399 299 ntBASIC4.79□□□□□ -1.64
GPC1P35052 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.79□□□□□ -1.64
GPC1P35052 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 SNORD116-26-201ENST00000516006 96 ntBASIC4.79□□□□□ -1.64
GPC1P35052 SNORA25.12-201ENST00000516202 82 ntBASIC4.79□□□□□ -1.64
GPC1P35052 RNU6-58P-201ENST00000517143 103 ntBASIC4.79□□□□□ -1.64
GPC1P35052 RNA5SP291-201ENST00000517222 105 ntBASIC4.79□□□□□ -1.64
GPC1P35052 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.79□□□□□ -1.64
GPC1P35052 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 AL138963.2-201ENST00000605137 226 ntBASIC4.79□□□□□ -1.64
GPC1P35052 AC007390.2-201ENST00000606229 3803 ntBASIC4.79□□□□□ -1.64
GPC1P35052 AL008718.3-201ENST00000610217 321 ntBASIC4.79□□□□□ -1.64
GPC1P35052 AL357075.2-201ENST00000614906 189 ntBASIC4.79□□□□□ -1.64
GPC1P35052 MIR6826-201ENST00000617808 98 ntBASIC4.79□□□□□ -1.64
GPC1P35052 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 AC092628.2-201ENST00000622492 339 ntBASIC4.79□□□□□ -1.64
GPC1P35052 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 AC107068.1-201ENST00000563286 4218 ntBASIC4.79□□□□□ -1.64
GPC1P35052 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GPC1P35052 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
GPC1P35052 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GPC1P35052 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GPC1P35052 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GPC1P35052 AL365440.1-201ENST00000436135 2167 ntBASIC4.78□□□□□ -1.64
GPC1P35052 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
GPC1P35052 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC1P35052 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GPC1P35052 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.78□□□□□ -1.64
GPC1P35052 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.78□□□□□ -1.64
GPC1P35052 Y_RNA.218-201ENST00000364218 104 ntBASIC4.78□□□□□ -1.64
GPC1P35052 U8.10-201ENST00000384260 133 ntBASIC4.78□□□□□ -1.64
GPC1P35052 U3.32-201ENST00000408116 212 ntBASIC4.78□□□□□ -1.64
GPC1P35052 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.78□□□□□ -1.64
GPC1P35052 RPL27AP8-201ENST00000424277 446 ntBASIC4.78□□□□□ -1.64
GPC1P35052 CR769767.1-201ENST00000436337 346 ntBASIC4.78□□□□□ -1.64
GPC1P35052 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC1P35052 RPL7AP61-201ENST00000443410 636 ntBASIC4.78□□□□□ -1.64
GPC1P35052 AC010095.1-201ENST00000443543 144 ntBASIC4.78□□□□□ -1.64
GPC1P35052 ATP5LP3-201ENST00000514223 304 ntBASIC4.78□□□□□ -1.64
GPC1P35052 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.78□□□□□ -1.64
GPC1P35052 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.78□□□□□ -1.64
GPC1P35052 MIR4458-201ENST00000578872 75 ntBASIC4.78□□□□□ -1.64
GPC1P35052 AC126915.2-201ENST00000610957 190 ntBASIC4.78□□□□□ -1.64
GPC1P35052 BX005214.3-202ENST00000619809 325 ntBASIC4.78□□□□□ -1.64
GPC1P35052 AC048347.1-201ENST00000624621 427 ntBASIC4.78□□□□□ -1.64
GPC1P35052 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GPC1P35052 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.78□□□□□ -1.64
GPC1P35052 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
GPC1P35052 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
GPC1P35052 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.77□□□□□ -1.65
GPC1P35052 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms