Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 FAM197Y4-202ENST00000622692 608 ntBASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HLA-DRB4X5D2U9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 HLA-A-209ENST00000638375 975 ntBASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.31□□□□□ -0.12
HLA-DRB4X5D2U9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DRB4X5D2U9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms