Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.74■■□□□ 1.07
CLIC4Q9Y696 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 AC083906.6-201ENST00000641366 219 ntBASIC21.73■■□□□ 1.07
CLIC4Q9Y696 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLIC4Q9Y696 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLIC4Q9Y696 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 AC005082.1-201ENST00000413042 2259 ntBASIC21.71■■□□□ 1.07
CLIC4Q9Y696 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 RPS2P4-201ENST00000476944 856 ntBASIC21.71■■□□□ 1.07
CLIC4Q9Y696 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLIC4Q9Y696 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CLIC4Q9Y696 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CLIC4Q9Y696 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 POU5F1P3-201ENST00000428824 1078 ntBASIC21.7■■□□□ 1.06
CLIC4Q9Y696 AC004980.1-204ENST00000429707 299 ntBASIC21.7■■□□□ 1.06
CLIC4Q9Y696 C1QBPP2-201ENST00000528754 825 ntBASIC21.7■■□□□ 1.06
CLIC4Q9Y696 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 AL445675.2-201ENST00000620291 557 ntBASIC21.7■■□□□ 1.06
CLIC4Q9Y696 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CLIC4Q9Y696 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms