Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL4A3BPQ9Y5P4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 AC096733.2-201ENST00000609937 1394 ntBASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 FAM210CP-201ENST00000445714 574 ntBASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 KRT8P41-201ENST00000533985 1514 ntBASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL4A3BPQ9Y5P4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 MFAP1P1-201ENST00000442257 1255 ntBASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 C2orf69P3-201ENST00000565542 1120 ntBASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL4A3BPQ9Y5P4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 KRT18P21-201ENST00000515767 1272 ntBASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
COL4A3BPQ9Y5P4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 KRT18P22-201ENST00000402024 1347 ntBASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.26■□□□□ 0.99
COL4A3BPQ9Y5P4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms