Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 MTDHP1-201ENST00000605323 784 ntBASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 AC079598.2-202ENST00000546624 1451 ntBASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA3Q9Y5H8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHA3Q9Y5H8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHA3Q9Y5H8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 KRT8P41-201ENST00000533985 1514 ntBASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA3Q9Y5H8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 BICD1-207ENST00000551848 1962 ntBASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA3Q9Y5H8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 AL355802.2-201ENST00000402069 882 ntBASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHA3Q9Y5H8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 AL390961.4-201ENST00000623958 2535 ntBASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.86■□□□□ 0.77
PCDHA3Q9Y5H8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms