Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB1Q9Y5F3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 AC010203.1-204ENST00000548782 407 ntBASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB1Q9Y5F3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 AC087388.1-201ENST00000571370 1112 ntBASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 AL445675.2-201ENST00000620291 557 ntBASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB1Q9Y5F3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB1Q9Y5F3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.02■□□□□ 0.63
PCDHB1Q9Y5F3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB1Q9Y5F3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB1Q9Y5F3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 TSPY21P-201ENST00000433481 731 ntBASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDHB1Q9Y5F3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 WWOX-216ENST00000569818 525 ntBASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms