Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 PRKY-204ENST00000533551 1019 ntBASIC17.92■□□□□ 0.46
RNF6Q9Y252 MIR4785-201ENST00000585005 73 ntBASIC17.92■□□□□ 0.46
RNF6Q9Y252 AC113410.3-201ENST00000623366 203 ntBASIC17.92■□□□□ 0.46
RNF6Q9Y252 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF6Q9Y252 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF6Q9Y252 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 RARRES2P10-201ENST00000564312 460 ntBASIC17.91■□□□□ 0.46
RNF6Q9Y252 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF6Q9Y252 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF6Q9Y252 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 KRT16P6-202ENST00000425692 1426 ntBASIC17.9■□□□□ 0.46
RNF6Q9Y252 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF6Q9Y252 AC009113.1-201ENST00000570267 2443 ntBASIC17.9■□□□□ 0.46
RNF6Q9Y252 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RNF6Q9Y252 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF6Q9Y252 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 MIR1224-201ENST00000408193 85 ntBASIC17.9■□□□□ 0.46
RNF6Q9Y252 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF6Q9Y252 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF6Q9Y252 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF6Q9Y252 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF6Q9Y252 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF6Q9Y252 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF6Q9Y252 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF6Q9Y252 AL161938.1-201ENST00000569833 2180 ntBASIC17.89■□□□□ 0.45
RNF6Q9Y252 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF6Q9Y252 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF6Q9Y252 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF6Q9Y252 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RNF6Q9Y252 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF6Q9Y252 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF6Q9Y252 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF6Q9Y252 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms