Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 SOX15-203ENST00000570788 1093 ntBASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 AC120498.8-201ENST00000614275 531 ntBASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 AC116351.2-201ENST00000606540 1585 ntBASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 AC139713.2-201ENST00000641328 2723 ntBASIC13.92□□□□□ -0.18
HHLA3Q9XRX5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 RNA5SP413-201ENST00000516373 109 ntBASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 AC008687.6-201ENST00000596318 630 ntBASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HHLA3Q9XRX5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 UNC93B4-201ENST00000505679 747 ntBASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HHLA3Q9XRX5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms