Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP2BQ9UQN3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP2BQ9UQN3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CHMP2BQ9UQN3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CHMP2BQ9UQN3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP2BQ9UQN3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2BQ9UQN3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms