Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 AP000523.1-201ENST00000398242 1049 ntBASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 ZNF444P1-201ENST00000559497 298 ntBASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SORCS3Q9UPU3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 AC246785.2-201ENST00000432512 513 ntBASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 AC112907.2-201ENST00000448639 330 ntBASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 AC083849.1-201ENST00000615227 514 ntBASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SORCS3Q9UPU3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 Z85996.1-201ENST00000494644 937 ntBASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SORCS3Q9UPU3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.03■□□□□ 0.8
SORCS3Q9UPU3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SORCS3Q9UPU3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SORCS3Q9UPU3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.02■□□□□ 0.79
SORCS3Q9UPU3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SORCS3Q9UPU3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms