Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DENND2AQ9ULE3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 AP000523.1-201ENST00000398242 1049 ntBASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 AC092647.4-201ENST00000457211 535 ntBASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 AL441883.1-201ENST00000566170 1045 ntBASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 NEK4P2-201ENST00000580004 1012 ntBASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 MYC-208ENST00000641036 567 ntBASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.05■■□□□ 1.28
DENND2AQ9ULE3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 AC009947.2-201ENST00000444014 672 ntBASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DENND2AQ9ULE3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 HOMER2P1-201ENST00000455653 964 ntBASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.03■■□□□ 1.28
DENND2AQ9ULE3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 COPE-203ENST00000351079 907 ntTSL 2 BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 CR769767.2-201ENST00000622735 460 ntBASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DENND2AQ9ULE3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
DENND2AQ9ULE3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 KRT8P3-201ENST00000519669 1449 ntBASIC23.01■■□□□ 1.27
DENND2AQ9ULE3 TEX21P-204ENST00000641479 1693 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms