Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD7Q9P2D1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.19■□□□□ 0.82
CHD7Q9P2D1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 AC022898.2-201ENST00000616822 1312 ntBASIC20.19■□□□□ 0.82
CHD7Q9P2D1 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD7Q9P2D1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 AC112907.3-201ENST00000577781 2400 ntBASIC20.18■□□□□ 0.82
CHD7Q9P2D1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CHD7Q9P2D1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.17■□□□□ 0.82
CHD7Q9P2D1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 AC007375.3-201ENST00000600936 2314 ntBASIC20.17■□□□□ 0.82
CHD7Q9P2D1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.17■□□□□ 0.82
CHD7Q9P2D1 AC092865.5-201ENST00000545435 363 ntBASIC20.16■□□□□ 0.82
CHD7Q9P2D1 LINC02084-201ENST00000606069 1096 ntBASIC20.16■□□□□ 0.82
CHD7Q9P2D1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 MIR3917-201ENST00000580971 93 ntBASIC20.16■□□□□ 0.82
CHD7Q9P2D1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 FAM220CP-201ENST00000395253 831 ntBASIC20.16■□□□□ 0.82
CHD7Q9P2D1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHD7Q9P2D1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 AF238378.1-201ENST00000526806 358 ntBASIC20.15■□□□□ 0.82
CHD7Q9P2D1 AC074051.2-201ENST00000565115 352 ntBASIC20.15■□□□□ 0.82
CHD7Q9P2D1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 TP73-AS1-207ENST00000624167 988 ntBASIC20.15■□□□□ 0.82
CHD7Q9P2D1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD7Q9P2D1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms