Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 FAM87A-204ENST00000613235 858 ntBASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 AC116562.4-202ENST00000641738 218 ntBASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.34■□□□□ 0.53
SPHK1Q9NYA1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPHK1Q9NYA1 AC092338.2-201ENST00000568827 1415 ntBASIC18.33■□□□□ 0.53
SPHK1Q9NYA1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 AC007663.1-201ENST00000438948 1240 ntBASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 CCR12P-201ENST00000446203 998 ntBASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 CA15P1-201ENST00000481698 905 ntBASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.33■□□□□ 0.52
SPHK1Q9NYA1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 FEM1AP3-201ENST00000403722 1741 ntBASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 AL353719.1-201ENST00000566847 864 ntBASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPHK1Q9NYA1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 SLC25A3P1-201ENST00000443844 931 ntBASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 AC128688.1-201ENST00000487626 519 ntBASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 AC005363.2-201ENST00000618631 242 ntBASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPHK1Q9NYA1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPHK1Q9NYA1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms