Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 AC135050.7-201ENST00000624508 2218 ntBASIC17.75■□□□□ 0.43
RLIMQ9NVW2 NBPF21P-201ENST00000425093 1451 ntBASIC17.75■□□□□ 0.43
RLIMQ9NVW2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 AC020763.4-201ENST00000623414 4170 ntBASIC17.74■□□□□ 0.43
RLIMQ9NVW2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 KRT17P3-201ENST00000420566 1262 ntBASIC17.74■□□□□ 0.43
RLIMQ9NVW2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 MTDHP1-201ENST00000605323 784 ntBASIC17.74■□□□□ 0.43
RLIMQ9NVW2 AC069544.1-201ENST00000609399 999 ntBASIC17.74■□□□□ 0.43
RLIMQ9NVW2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.74■□□□□ 0.43
RLIMQ9NVW2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 AL390961.4-201ENST00000623958 2535 ntBASIC17.73■□□□□ 0.43
RLIMQ9NVW2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RLIMQ9NVW2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 AC090164.3-201ENST00000610780 2143 ntBASIC17.72■□□□□ 0.43
RLIMQ9NVW2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RLIMQ9NVW2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 ESRRAP1-201ENST00000400596 1257 ntBASIC17.71■□□□□ 0.43
RLIMQ9NVW2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms