Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 AC128676.1-201ENST00000454392 318 ntBASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CTPS2Q9NRF8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTPS2Q9NRF8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.71■□□□□ 0.42
CTPS2Q9NRF8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTPS2Q9NRF8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CTPS2Q9NRF8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.71■□□□□ 0.42
CTPS2Q9NRF8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CTPS2Q9NRF8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 TSPY20P-201ENST00000450910 630 ntBASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 AL023875.1-201ENST00000640777 796 ntBASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS2Q9NRF8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 NBPF21P-201ENST00000425093 1451 ntBASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 FAM201B-201ENST00000458407 597 ntBASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 KRT18P16-201ENST00000510337 1294 ntBASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CTPS2Q9NRF8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS2Q9NRF8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms