Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 AC083906.6-201ENST00000641366 219 ntBASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUCKS1Q9H1E3 WIZP1-201ENST00000531444 2299 ntBASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 AC090164.3-201ENST00000610780 2143 ntBASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 GCSHP5-201ENST00000443090 522 ntBASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NUCKS1Q9H1E3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 RN7SL471P-201ENST00000580476 299 ntBASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 MTDHP1-201ENST00000605323 784 ntBASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NUCKS1Q9H1E3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NUCKS1Q9H1E3 AL158047.1-201ENST00000445918 881 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms