Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.77■□□□□ 0.28
SLIRPQ9GZT3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLIRPQ9GZT3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 AC018695.7-201ENST00000624587 2492 ntBASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 AC018553.1-201ENST00000616682 1458 ntBASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 AC022211.2-201ENST00000585075 2527 ntBASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 AC046158.3-201ENST00000624947 2558 ntBASIC16.76■□□□□ 0.27
SLIRPQ9GZT3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 AC138028.4-201ENST00000564984 1845 ntBASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 KRT18P20-201ENST00000548986 1279 ntBASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 NKILA-202ENST00000614771 2598 ntBASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLIRPQ9GZT3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 AP001160.3-201ENST00000601484 763 ntBASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 AC011676.5-201ENST00000624864 2660 ntBASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.74■□□□□ 0.27
SLIRPQ9GZT3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms